Syngnathus scovelli (Gulf pipefish): 125987472
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Entry
125987472 CDS
T08785
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-9-II
KO
K04810
nicotinic acetylcholine receptor alpha-9
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125987472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125987472
Ion channels [BR:
sscv04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
125987472
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
125987472
NCBI-ProteinID:
XP_049607859
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Position
1:11726666..11731890
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AA seq
552 aa
AA seq
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MIQIICLAMLLPSVVHSAQGHYAQKLLNDLMENYTSSLRPVEDTDRALNVTLQITLSQIK
DMDERNQVLIAYLWIRQRWHDAYLKWNKEDYDGLEIIHIPSNLVWRPDLVLYNKADDALS
GPMDTNVKLRYNGEITWDAPAITKSSCVVDVSYFPFDSQECNLTFGSWTYNGNQVDIFMG
MDSGDLSDFVENVEWECHGMPATKNVIMYGCCSDPYPDITYTVLLQRRSSFYIFNLLLPC
FLISFLAPLGFYLPADSGEKVSLGVTVLLALTVFQLMVAESMPPSESVPLIGKYYIATMT
MVTASTALTIFIMNIHFCGPEAKPVPHWAKVLIIDYMSKIFCVYEVGENCASSSSSSFSS
AHSAQDDVSRQCLTSHNGANGQVGCHSSREKRLGQNNPKPQTPTPQEHPKIKTQHHITRA
ERSLFSTFPLGKYECSNSKISARDSKDDQKVPCCQGDKNPPCCPEDKKTPVQGPTVTFGP
CVFCRHSNGTPSGDAKLVRNVEYIANCFREQRATCAKGAEWKKIAKVMDRFFMWIFFIMV
FLMSILVIGKAP
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaataatctgcctggccatgcttctaccttcggtggttcattcagctcagggt
cactatgcccagaagctactcaatgatttgatggagaactatactagttccctgcggcct
gtggaggacacagaccgagcactgaacgtcactttacagatcacgctctcgcagatcaag
gatatggatgagagaaaccaggtgttgatcgcctatctgtggataagacagaggtggcac
gacgcttacctgaagtggaataaggaagactacgacggattggagatcatccacatcccc
agcaaccttgtgtggagacctgacctcgtcctctataacaaagctgatgatgctttgtct
gggcccatggacaccaatgtgaagttgcgctacaatggagagatcacctgggacgctccc
gccatcaccaagagctcctgcgtggtggacgtctcatactttcccttcgacagccaggaa
tgtaacctgacctttggatcctggacctacaatggaaaccaggtggacattttcatgggc
atggacagcggggacctgtccgactttgtagaaaatgtggagtgggagtgccacggcatg
ccggccacaaagaacgtcatcatgtacggctgctgctccgacccgtacccggacatcacc
tacactgtgctgctgcagcgccgctcttccttctacatcttcaatctcctccttccatgc
tttctcatctcctttttggctcctcttggattctacctgcctgcagactctggggagaag
gtttccctgggggtaacagtgcttctggctctcaccgtgtttcagctcatggtggctgag
agtatgcctccttcagagagtgtgcctcttataggcaagtactacattgccaccatgaca
atggtcacagcttccacagctctcaccatcttcatcatgaatatccacttttgcggtccc
gaggccaaaccggttccacactgggcaaaggtcctcatcattgactacatgtctaagatc
ttctgtgtgtacgaggtgggcgagaactgcgcctcctcctcatcctcgtctttttcatcg
gctcactcggctcaggatgatgtcagtcgccagtgcctcacatcgcataatggagcaaac
ggccaagtgggatgtcacagtagtcgagaaaagcgactgggtcaaaacaaccccaagcct
cagaccccgacaccacaagaacatcctaaaataaaaactcagcaccacatcaccagggca
gagaggagcctcttttcgacctttccacttgggaagtacgaatgctcgaatagcaagatt
tcggcaagggactctaaagatgatcaaaaggttccatgttgccagggtgacaaaaatcca
ccctgctgccctgaagacaaaaaaacaccagttcaaggccctacggtaacatttggtccc
tgtgtgttttgtcgtcatagcaacggcaccccaagtggggacgctaagttggtgcgtaac
gtagagtacattgcaaattgtttccgagagcagagggccacatgcgccaagggagccgag
tggaagaagattgctaaagtgatggacaggttcttcatgtggatcttcttcatcatggtc
tttcttatgagcatccttgtcattggaaaagccccgtga
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