Syngnathus scovelli (Gulf pipefish): 125987507
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Entry
125987507 CDS
T08785
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125987507
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
125987507
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
125987507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
Ank_2
IBR_2
Ank
Ank_5
Ank_4
Ank_3
UBA_ARI1
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
125987507
NCBI-ProteinID:
XP_049607882
LinkDB
All DBs
Position
19:complement(8318560..8332906)
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AA seq
1156 aa
AA seq
DB search
MGNAATKFRKALVGGDEALAWQLYEGNPQFRDGLDPNASYGEQYQHNTPLHYACRHSMTR
LLRSFLFSKEGNPNKRNVRNETCLHVLCQSPLILLLPEGALSPRLVRPQRDEQRRADCLQ
MILSWTGARLEGGQYEKANVNATDNRRSTCLHYAAASGMKSCVELLIRSEADLFIEDDDK
LTPCDHAERHHHTELALSLESQMVFSSSPLATRSDADARGQVKLLQHKEPYEGLKLQDLR
RLKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSDAEGCCQRSGVAMPTPPPS
GCNAWDTLPSPRTPRTPRSPVTLTFTSPTDSCLTPADEGMATCGICLCSISVFEDPVDMS
CGHEFCRACWEGFLNVKIQEGDAHNIFCPAYECYQLVPVHVIESVVSREMDQRYLEFDIK
AFVENNPAIRWCPAARCERAVRLTRPGPGESDPHGFPLLPSPAVDCGKGHLFCWECLGEA
HEPCDCHMWRNWLQKVTEMKPEELAGVSEAYEDAANCLWLLSNSKPCANCKSPIQKNEGC
NHMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQLEEQSKEMTVEAEKKHKSF
QELDRFMHYYTRFKNHEHSYKLEQKLLKTAKEKMEQLSRAFISREGAPPDTRFIEDGVSE
LLKTRRVLKCSYPYGFFLQQGSTQKEIFELMQTDLEMVVEDLAQKVNRSYLRTPCHKIVS
AARLVQQKRQEFLASVARGVAPNDSPELQRRSYAGGSWDWEYLGVASPEMGSRHSVLAAG
DQRDRASQDFSDIQYRRRHRARHRGDMLSLHTLRSSSNTPESSRRSDSTDGPERSEGRRR
ALGSLDEDDPNILLAIQLSLQESRRERGPEGSPDLERSLEGPLPSDVQAGATRGSHSHPD
PPRPPHRTDPLCCSSSAPLSATLPLPPPPPPLSAELLKLGDSLMKPGNLASPTADPQSHC
LGSARPAEAEHTARESPTDYAIRCSPAQLYLPSPELEPELLLLSPVIPPGGAFTPSDPQS
LEALDPAASAQLLDNIMAWFNHNITPQNNPQSLALIPSPPTTESDSSPDVLTDAGAENVA
ARQPPEGQPDTPPHSCPSRPSTLELDNRAAQEEEEQSGAGAVDASPYGDGATDSDLVLML
EEDLSPVEWEEKVHLV
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgcggccaccaagttccggaaggcgctggtaggcggtgacgaggcgctggcc
tggcagctgtacgagggcaacccgcagttccgtgacggcctggaccccaacgcctcatac
ggcgagcagtaccagcacaacacgccgctgcactatgcgtgccgtcactccatgacgcgg
ctgctcaggtcctttttattcagcaaggagggcaaccccaacaagcgaaacgtgcgcaac
gagacgtgcctccacgtgctgtgccagagcccactcatcctgctgttgcccgagggggcc
ctgtcgccacgcctggtccgccctcagcgggacgagcagcggcgggccgactgcttgcag
atgatcctgagctggacgggggctcggcttgagggaggccagtatgagaaggccaacgtc
aacgccactgacaaccgccgcagcacatgcctccactacgccgccgcgtcgggcatgaag
agctgcgtggagttgctcatccggagcgaggctgacctgttcatcgaggatgacgacaag
ctgactccgtgcgaccacgccgagcgccaccaccacaccgagctggctctcagcctggag
tcgcagatggtcttctcctcgtcgccgctagcgacgcgctcggacgcagacgcgcgcggc
caagtcaagctgctgcagcacaaagagccgtacgagggcctgaagctgcaagaccttcgt
cggttgaaggacatgctgatcgtggagacggccgacatgttgcaagcacccctcttcact
gcagaggccttgctgagagcgcacgactgggacagagagaagctgctggaggcgtggatg
tcagatgccgagggctgctgccagcgctcgggcgtggccatgcctacgccgccgcctagc
ggctgcaacgcctgggacacgctgccctcgcctcgcactccccgtacgccgcgctcgccc
gtcacgctcaccttcacctcccccaccgacagctgcctcacgcctgccgacgagggcatg
gccacgtgtggcatctgcctgtgctccatctccgtctttgaagatcctgtggacatgtcc
tgcggccacgagttttgccgggcctgttgggaggggttcctgaacgtgaagatccaggag
ggcgacgcccacaacatcttctgccccgcctacgaatgctaccagctggtgcctgtccac
gtaatcgagagcgtggtctcccgagagatggaccagcgctacctggagtttgacatcaag
gcctttgtagagaacaatccggccatccgctggtgtccggcggcgcgctgtgagagggcc
gtgcgacttactcggcccggcccgggcgagagcgacccgcacggcttcccgctgctgccc
tccccggccgtcgactgcggcaagggccacctcttctgctgggagtgcctcggcgaggcc
cacgagccatgcgactgccacatgtggaggaactggctccagaaagtcaccgagatgaag
cccgaggagctggcaggtgtgagcgaggcttacgaggatgctgccaactgcctgtggctg
ctgtccaactccaagccctgcgccaactgcaagtcccccatacagaagaacgagggctgc
aaccacatgcagtgtgccaagtgcaagtatgacttctgctggatctgcctggaggagtgg
aagaagcacagctcatcgacgggaggctactaccgctgcacgcgctacgaagtgatccag
cagctggaggagcagtccaaagagatgacagtcgaggcggagaagaagcacaaaagcttc
caggagctggaccgcttcatgcactactacactcgattcaagaaccacgagcacagttac
aagctggagcagaaactgctgaagacagccaaggagaagatggagcagctgagcagagct
ttcattagtcgtgagggtgccccgccagacacgcgcttcatcgaggatggcgtcagtgag
ctgctgaagacgcggcgcgtgctcaagtgctcgtacccgtacggcttcttcctgcagcag
ggaagcacccagaaggagatctttgagctcatgcagacggacctggagatggtggtggag
gacctggcgcagaaggtcaaccggtcctacctgaggacgccgtgccataagattgtcagc
gccgcccgcctggtccagcagaagcggcaggagttcttggcgtctgtggcccgcggtgtg
gcacccaacgactcgcccgagctccagcgaaggagctacgccggaggatcgtgggattgg
gaatacttgggcgtcgcctctcctgagatggggagtcgccactctgtgctggcagcagga
gaccaaagagaccgagcgtcacaggatttttctgacattcagtatcgccggcggcaccga
gcacgacacaggggagacatgctgagtctgcacactcttcggagcagcagcaacacgcct
gaaagcagcagaaggagcgacagcacagatggcccagagaggagcgagggccggcgtaga
gcgctgggctccctggacgaggacgaccccaacatcctgctggccattcagctgtccctt
caggagtctcggcgagagcgaggccccgagggcagccctgacttggagcgcagcctagaa
ggtcccctccccagcgatgtccaagcaggagcgacaaggggctcgcattcccaccccgac
cctccacgccctccccacaggacagaccccttgtgttgttcttcttcagctccgttgtct
gccaccttacccctccctccaccgcctcccccgctcagcgccgagctgctgaagctgggg
gacagccttatgaaacccgggaacctggcgtctcccactgcggaccctcagagtcactgc
cttggaagcgcacgtccggccgaggctgaacacactgcccgcgagagtccgaccgactac
gcgatccgatgctcccccgcccagttgtacctgccgtctccggaacttgaacccgagctg
ctgctgctgtcacctgttatcccgccagggggggcgttcacgcccagtgacccgcagagc
ctggaggccctggatcccgctgccagcgcccagctgctggacaacatcatggcctggttc
aaccacaacatcaccccacagaacaaccctcagagcctggccctcatcccctcgccacct
accaccgagagtgactcatccccagacgtgctcacggatgcgggcgccgagaacgtcgcc
gcccggcagcccccagagggccagccagacacgccgccacactcttgcccaagcagaccc
agcacgctggagctagacaacagagcagcccaggaagaggaggagcagagtggcgcaggg
gcagtagatgcgtctccttatggagatggcgccacagactctgaccttgtcctcatgctg
gaggaggacctgtccccggtagagtgggaggagaaagtccacctggtgtga
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integrated database retrieval system
