Syngnathus scovelli (Gulf pipefish): 125987530
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Entry
125987530 CDS
T08785
Symbol
canx
Name
(RefSeq) calnexin isoform X1
KO
K08054
calnexin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04141
Protein processing in endoplasmic reticulum
sscv04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125987530 (canx)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125987530 (canx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sscv03110
]
125987530 (canx)
04131 Membrane trafficking [BR:
sscv04131
]
125987530 (canx)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sscv04091
]
125987530 (canx)
Chaperones and folding catalysts [BR:
sscv03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
125987530 (canx)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
125987530 (canx)
Autophagy
ER-phagy
Other ER-phagy associated proteins
125987530 (canx)
Lectins [BR:
sscv04091
]
L-type lectins
125987530 (canx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
PFF1_TM
Spore_coat_CotO
Connexin
Neur_chan_memb
DDHD
Piezo_TM1-24
GRA6
SieB
Motif
Other DBs
NCBI-GeneID:
125987530
NCBI-ProteinID:
XP_049607933
LinkDB
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Position
1:23883792..23892414
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AA seq
618 aa
AA seq
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MDRTVWLFVVLAMGVLCLSLAPACGAHDPDEDLLGEDMDVEDEDLDMDLGADDEPEDDHD
TPALPKTPPVPKVTYKAPEPMGEHYFAESFDRGTLDSWVLSSAKKEDTDDDIAKYDGKWE
VEEMKDSKLPGDKGLVLKSRAKHHAISALLLRPFTFDTMPLIVQYEVNFQAGIDCGGAYV
KLLTQTPELELAQFVDKTGYTIMFGPDKCGEDYKLHFIFRHKNPKTGQYEEKHAKKPDAD
LRTYYTDKKTHLYTLVLNPDNTFEMLVDQTVVNSGSLLTDMTPPVNPPAEIEDPDDHKPE
DWDERPKIQDPDASKPEDWDEDAPAQIPDENAVKPDGWLDDEPEYIGDPDAVKPEDWDED
MDGEWEAPQIPNPACEAAPGCGLWKRPTIDNPDYKGKWKAPMIDNPNYQGIWKPRKIPNP
DFFEDLHPFRMSAFSAVGLELWSMTSDIFFDNFLVTDDRNVAERWANDGWGLKKAAEGAA
EPGLAAQMMNAAEERPWLWVVYVLTVALPLVLIFVFCCTGKKKSEASAAAADYKKTDEPQ
PDVKEAEEEAQEEDMSSADGKGDGEEEANDESPADKEEVDGDKEEEDKEEEDKEASVEEK
LEDDVLRRSPRNRKVRKD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtacggtgtggttgttcgttgttttggcaatgggtgttctctgcctgagcctg
gcgccggcatgtggggcccacgaccctgacgaggacctcctgggtgaggacatggacgtt
gaagatgaagacctggacatggatttgggagcagacgacgagccggaggacgaccacgac
accccggcgcttcccaaaaccccgcccgttcccaaagtgacctacaaagcgccggagcca
atgggagaacactactttgccgaatcttttgatcgtggaacgctggacagctgggtgctg
tccagtgccaagaaggaagacacagatgatgacatcgccaagtatgatggcaagtgggag
gtagaggagatgaaggacagcaagcttcccggcgacaaaggtttggttctcaagtctcgt
gccaaacatcacgccatctctgccctgctgctgcgaccattcacttttgacaccatgcca
ctcattgttcagtacgaggtgaacttccaggccggcatcgactgcggcggtgcttatgtg
aagttgctcactcagacgcctgaactggagctggcccagtttgtggacaagacgggatat
accatcatgtttggaccggacaaatgcggagaggactacaagctgcacttcattttcaga
cataagaatcccaagacaggacaatacgaggagaaacacgccaagaagcccgacgctgat
ctgcgcacatactacactgacaagaagacgcacctctacaccctcgtgctaaaccccgac
aacacatttgagatgctggtggaccaaacggtggtgaacagcggcagtttgctgacggac
atgacccccccagtcaacccccccgccgagattgaggacccagatgatcacaagcccgaa
gactgggacgagagacccaagatccaggacccggatgccagcaaacctgaagactgggac
gaggacgctccagctcagattcccgacgagaatgcggtcaaacctgacggctggctggac
gacgagcccgagtacattggagaccccgacgctgtcaagcccgaggactgggacgaggac
atggacggcgagtgggaggcgcctcagatccccaacccggcctgcgaggcggcgccaggc
tgtggcctctggaagcgccccactattgacaaccctgactacaagggcaagtggaaggcg
cccatgatcgacaacccgaactaccagggcatttggaagcctcgcaagattcccaatccg
gacttctttgaggatctgcaccccttccggatgagcgctttcagcgctgtgggcctggaa
ctgtggtccatgacgtccgacatcttcttcgacaacttcctggtcaccgacgaccgcaac
gtggctgaacgctgggccaacgacggctggggcctcaagaaggcagccgagggtgctgct
gagccgggcctggcggctcagatgatgaacgcggcagaggagcgtccttggctttgggtc
gtctacgtgctgacggtggccttgccgcttgtcctcatcttcgtcttctgctgcaccggc
aagaaaaagagcgaggcctcagcggcggcagcagactacaagaaaacggacgagcctcag
cccgatgtgaaggaggctgaagaggaggcccaagaggaggacatgagcagtgcagatggc
aaaggtgacggcgaggaagaggccaacgatgaaagccccgccgacaaagaggaggtggat
ggcgacaaggaggaagaggacaaggaggaagaggacaaggaggcgtcagttgaagagaag
ttggaggatgacgttctgcggagatctcccaggaacaggaaggtcagaaaggactga
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