Syngnathus scovelli (Gulf pipefish): 125987774
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Entry
125987774 CDS
T08785
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1 isoform X1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sscv03032
]
125987774 (rtel1)
Enzymes [BR:
sscv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125987774 (rtel1)
DNA replication proteins [BR:
sscv03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125987774 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
USH1C_N
Motif
Other DBs
NCBI-GeneID:
125987774
NCBI-ProteinID:
XP_049608196
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All DBs
Position
2:13651394..13661190
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AA seq
1133 aa
AA seq
DB search
MPSLTLDGVRVEFPFTPYECQKDYMMKVIECLKNGVNGILESPTGTGKTLCLLCATLAWR
EHFKDGILGRIIAERLKENNTSADNFPESWGASSEDGSMPTSCTDVPKIIYASRTHSQLT
QVVNELKNTSYKPKVSVLGSREQLCINPEVMRQESNHIKVHLCRAKVSTRSCVFYNNVEE
KSTDKGLVEQIVDVEDLVKFGNKHRSCPYYLSRSLKQQADIIFMPYNYLLDPKSRRAQSI
DLAGSVVIFDEAHNVERTCEESTSFDMTPYDLASAINALTRLLNDHVQEASFADTSSQGL
KTDIQVVAKLKEAVLKLEAAIDSFEVSDDKGITRPGIFIYELLEKAHLTYDTKEAMSEAL
EQIIGYLAGQPGIFLNTSGLQKLLDIIQLVFCGKELAQKDRQMVMETNTAHFKVHIHKDT
QKKQKNGDPWALSTKKPGNILSYWCFSPGFSMQDLKSQGVRCIILTSGTLSPLSSFASEM
RIPFSVSLENSHVIERDQIFVSVIDQGPDRVPLSSAFDRRFNPENMSSLGNTVVNLTRIV
PNGLLLFFPSFYLMDKTLEFWRDKGHANQIESVKPIFVEPKGKGAFAEAIEGYYTKVNDF
QSRGAIFAAVCRGKASEGLDFTNTFGRGVIVTGLPFPPKMDPRIILKMQFLDEMNRKQLA
VPGQKLLTGQEWYREQAFRAVNQAIGRVIRHKDDYGAIFLCDQRFKSRDAQSQLPSWVRP
YVRSYDKFGNIVRDVCQFFRVAQKMRPVMEKNPAPDPSVFPAGSCQSSVPQCSAATSYAP
CQMPSIQKAKMLDIHTSTLKRRRTDEDTEYASIFKQYGVQTQKSKIKPTNLFEALERVER
QSEWRSALGQEMQSNLSTLSLQNDKRMEEMMRGGKRKINLVQEQPSVSGLATGNRKTSIA
RCFLVDMKSSLSEVSFEQIRQALQSYKQNDNLDNLLSGTSLLIHDPHTYRLFRGLYPFVR
PHHRKAFDEKCRELTGTSCGYEPKHSIRKDEKSSGASHSAGDQPTEAQLDEEQTKLEGDK
ETESAEDELQKRNRTVFLTDMRRALGPDGSVKLYRAIHAYKITDNYENLVTTAVALLTEK
DEDFSLLIKFTNVIRPHHKKQYKAMLKELMGLSANTDPDSREQTETENRQSTA
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgccttcattaactttggacggagtgagagtggagtttcccttcaccccgtatgaatgt
cagaaggactacatgatgaaagttattgaatgtctaaagaacggggttaatggaatcctg
gagagtcccacaggcactgggaaaaccttgtgtctactatgtgccaccttggcatggagg
gagcacttcaaagatggcatcttgggacgtataatagcagaaaggttgaaggagaacaat
acctcagctgataattttccagaatcttggggggcatcttcagaagatggttcaatgcca
acctcctgcactgatgtccccaagatcatctatgcatcacggacacactcgcagctaacc
caagttgttaatgagttaaagaacacatcatacaaacctaaggtgtctgtgttgggatca
agagagcagctgtgtatcaatccagaagtgatgcgacaggaaagcaaccatatcaaggtc
catttgtgtcgagcgaaagtctccacaaggtcgtgtgtcttctacaacaacgttgaagag
aaaagcactgacaaaggattggtggagcaaattgtggatgtggaagacctggtcaaattt
ggcaacaaacataggtcttgtccgtattatctctcacgttctttaaaacagcaggctgat
atcattttcatgccgtataactacctgctagatcccaagagccgcagagctcagagcatc
gacttggctggatctgttgtcatctttgatgaggctcataatgtagaaaggacgtgtgaa
gagtcaacatcatttgacatgacgccatatgatctagcctcagccattaatgcacttacc
agattgttaaatgaccatgttcaagaagcgagtttcgcggacacttcgtctcaaggttta
aaaacagacatacaagttgttgctaaactcaaagaggctgtgttgaaactggaggcagct
attgattcctttgaggtttcggacgacaaaggcataacgagacctggaattttcatatat
gagctgctagagaaagcccacttgacatacgacaccaaagaggctatgtctgaagctttg
gagcagatcattggatatctagcaggacagccagggatattcctcaatacgagtggcttg
cagaagctcttggatatcatacagttggtgttctgtggtaaagaattagcacagaaagat
cggcaaatggtcatggaaaccaatactgctcattttaaggttcacatccacaaagacact
cagaagaaacaaaaaaatggtgacccatgggctttatcaacaaagaaaccaggaaacatt
ctgagttattggtgtttctctccgggcttcagcatgcaggacttgaagagtcaaggtgtt
cgctgcatcattctgaccagcggtaccctttctcccctgagctcctttgcgtcagagatg
aggatacccttttctgtctctttggaaaacagccatgtgattgagcgggatcagatcttt
gttagtgtcatcgaccagggtccagatagagtaccattgagttcagcatttgatagaaga
tttaatcctgaaaacatgtcatctttaggaaacactgtggtaaacctgacccggattgta
cccaatggtctccttttgttttttccctccttctacttgatggataaaactttggagttc
tggagagacaaaggacacgcaaatcagattgaaagtgtaaagccaatatttgtggaacca
aaagggaagggagcttttgctgaggccatcgagggttattacaccaaagtgaatgacttt
caatcaagaggtgcaatctttgctgcagtgtgtcgggggaaggctagcgaaggtctggat
tttacaaatacctttggtcgtggtgttatagtcaccggactcccatttccgccgaagatg
gacccgagaatcattttgaagatgcagttcttagacgagatgaaccgaaagcaattagcg
gtacccggccagaagctccttacagggcaagagtggtacagagagcaggctttcagagct
gtcaatcaggctatcggcagagtcattcgccacaaggacgactatggagccatcttcctc
tgcgatcagagatttaaaagcagagatgcccaatctcagcttccatcatgggtgaggccc
tatgtgcggtcttatgacaagtttgggaacattgttcgtgatgtctgtcagttcttcagg
gttgcgcagaaaatgaggcctgttatggagaagaatcctgcgcccgatccgtctgtgttt
cctgcaggcagttgtcagtcatcagttcctcaatgctctgctgcgacttcttacgcaccc
tgccaaatgccgtccattcaaaaggccaaaatgctagacatacacacttccactctaaaa
aggaggagaactgatgaagataccgaatatgctagtatttttaaacagtacggggttcag
actcaaaagagtaaaatcaaaccaaccaacctgtttgaggcccttgagcgagtagagcgc
caaagcgaatggagaagtgctcttggacaagagatgcaaagcaatttgtccacactttcg
cttcaaaacgacaagagaatggaagagatgatgcgtggaggcaaacgcaaaatcaatttg
gtccaagaacagccaagtgtttctggcttggctaccggaaatagaaagaccagcatcgcg
aggtgctttctggtagacatgaaatcatcgttgagcgaggtcagctttgagcaaattcgc
caggctctgcaatcctacaagcagaatgacaatctggacaatctgctgtccggcacatcg
ctgctaatccacgaccctcatacttatagacttttccggggtttatacccctttgtgcga
ccacatcacaggaaggcatttgacgaaaaatgccgggagctgactggtactagttgtggc
tacgaaccgaaacactcaatacgcaaagacgaaaagagctcaggggcgtcacatagtgca
ggtgaccaacccactgaagcgcagctggatgaagagcaaaccaaactggaaggagataaa
gaaactgagtccgcagaagatgaactacaaaagagaaaccggactgtatttctgactgat
atgagaagagcactcggtccagacggatcagttaaactctatcgagctattcacgcctac
aagataacggacaactatgaaaatttggtgactacagccgtagccttattaacagagaaa
gatgaagacttcagccttctaatcaaattcaccaatgtcattcgccctcaccataagaag
cagtacaaagcgatgttgaaggagttgatgggtctgtctgctaacactgatcctgattca
agagagcagacagaaactgagaacaggcaatcaactgcatga
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