Syngnathus scovelli (Gulf pipefish): 125987784
Help
Entry
125987784 CDS
T08785
Symbol
nbeal1
Name
(RefSeq) neurobeachin-like protein 1 isoform X1
KO
K23286
neurobeachin-like protein 1/2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125987784 (nbeal1)
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Others
Others
125987784 (nbeal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
DUF4800
NBCH_WD40
DUF4704
PH_BEACH
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
GRAM
Beta-prop_Vps41
Laminin_G_3
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
125987784
NCBI-ProteinID:
XP_049608212
LinkDB
All DBs
Position
2:complement(6494036..6519439)
Genome browser
AA seq
2778 aa
AA seq
DB search
MASSERLYEVWMLYCTKRDPDYLKLWLESFISSYDRCLDVDFEKPPLRLEEPPPVLTLLP
DNILQVLRHQLLQCVQKASDGLEPEQQNLALLLLKFLIIVCRNLSNVEEIGTCSYINHII
AMTTLYIQQLKSNTKEKELVDQSQAEEFVRHALAFCESLYDPYCNWRHRICGKQLGTVER
SRQKYKAAPLTVEFVPFFYQCFQESEHLKESLKCCLLHLFGAIVAGDQKNALLAISPATM
EVLIRVLVDSSMGSCSSDEGEDWDSEAPDRKACLTLGCLRVVVQCLLAASSDQRQVEIAS
VLENYFKLLNSDPAAVVAARQPQQQHAKVRVATLGRHWESRFVALQVHMLDTMRDMFLCS
DRPVLQAIFLNSNCFEHLTRLLQNSKLVNARCTAADKDQKDITNNRLLTGGRDTQVIQGR
LDSLAVATIKALTTVMHKSPAAKEVFKERIGYNHLYEVLVSLGQPSRHLLKELMNMAVEG
EHTSVGLLGISNVEPLLLLIQWLPELDSSELQIFAADWLCRLICLNQQTRTTCVNAAMVL
RALAVLECHRRLHRVCAESLLRLVGSLGSQSLSARDLLRLLHLLRPPESNQAHPYVGPAL
KALLAMVRKQGLESAMQYFDLSPSMAGIAVPTVQRWPGSAFSFLAWLSLDQDQLGPISKD
KRKQLYSFFTSGGMGFEAFISSAGLLVVAVCTKKEYVTVMLPDNCFCDSLWHSIGVVHVP
GKRPFGQSLVYIYVDGQQKLSAPLKYPTMSEPFTSCCIGSAGHRTTTPPPSQIPDPPISS
ATSPSTRSSLGSILSPHTWGGLLSGKPESVTKLISAGTQDSEWGSPTSLQGHLASVIVFH
EALQPNHIKALCSAGPNCVSPLKAQESELGDLSSKLLLHYSPKACQNPICLDLSPNKLHG
RLTGKKVVNWDIKDMINCVGGLQVLFPILEQLSLMTPDQANSDASTGSDFITPDVTTPPD
GEWVILPSSRASEARLEKNLVATFLLVLKHFLQRHAINQENLLHSHGVATLGALLQKLPA
GHIDVNVLVAMQLLIEQVTYEKNQGLLQQLHTHLLFNFNIWNKGDFPLRIGHIQYLTTVI
KDNRKQFRKKYGVRFLLDIIRLYYGKNSNKESDLSEDDIVNIRASLCDLIKYYISKGVSQ
EEMHSIIGYIAAIGDEDQICGLFEMLLSLLQNSPSRDQLFLLLFEPGAADSCYALLLNNK
HSDRLRELVFKLFERMLRCDRIYEKNKQRLRLREAGYNGLSLLFSDLHITPTLIRCLLNQ
VLHTDQVVNYKDLMALVQLTHRTGPRVRLIVCKRVYQLLQSQQDAGCQISKQQCWQDTLA
RLFLRGEGSLTSRNADTVSNCSLDLNQSSGSNNNRLELPLHRKTRASSAGRLDRPEDDWL
SMGDNRSVDSLENGDVISLLDTPSSSASAEPQGQVKPWPVGKSAGLTLDLSHLQAYEALE
SGSQTPGSIHSTPSPSDAPKPFPGNSGVLDQSAPLTEDTFLFSDNISLGESLNNTERAEE
ELCNMLLDIIQCVMWRGVEGSDDSAWLERGQVFSALSKLGTANELLLPVDQIKLGLMERM
LELAVTDNREASAATLPQHTENAVRLLHIVQDFLQAEGLINPSLWTEKVLEETVTLMDCL
MVWYSAGTQWFQLSQIGLRLLLGFMAQEDPEVCAIATAKLNFILQMKEVSSQDEACYLLG
KVECILRRSVQEKTEETYSFLVPLLRTLLSKVHRLLYMELHLPQLPDTNGSPSFFEDFQL
YCNSPEWRVYLDKYIIPYMKQYEIETFSQGHESMALYWKECYEAFMVSLHKRERERGESK
ICFQEHFVEPFSRQSRQENQRYNSMLKQQHSQNSASLRQWKAARRGLVCERGPWAERQPK
RMHWKLSSAENFSRMRLKLIRNYNFDPYKEASALRDNLGVHHQFVNPESLLLEAVKQVKV
TNLEDDILELPEDDLAAANNQIEAEEAGQKEKLILWEDCQLVTVVDVVPGRLELTTQHIY
FYDSSQEKDEGVGHDFKWPLSQIREVHLRRYNLRRSALEIFLIDQTNYFLNFKKEARNKV
YDRMLLLRSLSLYGTRSPQELLKASGLTQKWVNREISNFDYLMQLNTIAGRTYNDLAQYP
VFPWVLADYTSKELDLSDPLVFRDLSKPVAVQNNRNAKAVREKYDSFEDPTGTIDKFHYG
THYSSAAGVMHYLIRVEPFTSLHIQLQSGRFDCADRQFHSIPATWLTLMDNPNDVKELIP
EFFYFPEFLENHNDFDLGRRQITKEKVNDVILPKWAKSPEDFIYKHRKALESEYVSAHLN
EWIDLIFGYKQRGPAAVEALNVFYYCTYEGAVDLDAITDEKERKALEGMISNFGQTPCQL
LKEPHPIRLSQEEVEKRKAMLDSCPLVMFEHLSNLKSFFVEGISDNVPLVKAIVPKNQSH
SFISQGSPDTMVTVSQNCLFGTHGWLPYNKNISNYFTFIKDPTVSHAKTQRFLSGPFAPG
VEVTTRLFVVSHDGKLLFSGGHWDNSLRVTSLVKGKTVGQHIRHMDIVTCLSTDHCGIHL
ISGSRDTTCMVWQVLQQGGAPIGLNPKPVQVLYGHTDEVVSVCISTELDMAVSGARDGVV
IIHTVRRGQYVRCLRPPCDSSLPLSVLHLAVSWEGHLLVHTCLEGKATLKDKNTLHLYSV
NGKHLCSEPLKEQITDMCVSGEFVVTGSEQGYLSIRDLYSLSLCAEPMAMHVPVRCVSVT
KEQSHILLGLQDGKLIIVGVGKPAEVKNSLRNYIAQSLEGSPLMASPLLAPLRARSPTRL
LHQRDQLVFSPTSVIHKP
NT seq
8337 nt
NT seq
+upstream
nt +downstream
nt
atggcatctagcgagagactctacgaggtctggatgctttactgcaccaagagggaccca
gactacctgaagctatggctggagagtttcatcagctcctatgacagatgtctggatgtg
gactttgaaaagccaccgttaaggctggaggagcccccaccggtactgacccttctccca
gacaacatcctccaggttttgcgccatcaacttctgcagtgcgtccaaaaagcctctgat
ggtcttgagcctgagcagcaaaacttggcactgctgctgctcaagttcctcattattgtc
tgcaggaacctgtccaatgtggaggagataggcacctgctcctacattaaccacatcatt
gccatgacgacactttatatccagcagctgaagagcaataccaaagagaaggagttggtg
gaccagagccaagctgaggagtttgtccgtcatgcactggcattctgcgagagcctctat
gacccttattgcaactggaggcatcgaatctgcggaaagcagctgggcacagtcgagaga
agcaggcagaagtacaaagcggctccacttactgtggaatttgtccccttcttttaccag
tgttttcaagagagtgagcaccttaaggaaagcttgaaatgttgtctactgcaccttttt
ggtgctatagtagctggtgaccagaaaaatgcactgcttgccatctctccggccaccatg
gaggttttgatccgagttctggtggacagctctatgggtagctgttcgtcagacgaaggc
gaggactgggacagtgaggcccctgatcggaaggcatgtctgactttaggctgtttgagg
gtggtggtgcagtgcctcctggccgccagctccgaccagcggcaagtagaaatcgcctcg
gtgctagaaaactacttcaagctgctcaattcagacccagcagctgtggttgctgctcga
cagccacagcagcagcacgccaaagttcgagtggcaacactaggcaggcactgggagagc
cgctttgtggcactgcaagtgcacatgctagacacaatgagggacatgttcctttgttca
gacaggccagttctacaagccatcttcctcaatagtaattgctttgagcatctgacacgt
ctactccagaatagcaagctggttaacgctaggtgcacggcggcagacaaggaccagaaa
gatataaccaacaacaggttactgacaggagggagagacactcaggtgatacaaggacgc
ttagactctcttgctgtagcaactattaaagccctcaccacagtgatgcataaatcaccg
gctgccaaggaggtgttcaaagaaagaattggttacaatcacttatacgaagtcctcgtt
tcgctcggccagccatctcgacacctccttaaagagctcatgaacatggcggtggagggc
gagcacacatctgtgggcctcttgggaatcagcaatgtggagcctttactcttgctcatc
cagtggctgccggaattagactcatccgagttgcagatctttgctgctgactggctctgt
cgacttatctgcctcaatcagcagacacgcactacctgtgtcaatgccgccatggtcttg
agagcgctggctgttctcgagtgccaccggcggctacatcgagtttgtgcagagagcctt
ttgcgtctggttggctctcttggctcccagtccctaagtgccagagatcttcttaggctc
ctgcacctgctcagaccaccagagtccaaccaagcacatccttatgtgggacctgctctg
aaagctctcttagccatggtacggaagcagggtctggaaagtgcaatgcagtacttcgat
ctctcgcccagcatggctggcatcgctgttccaactgtgcagcgctggccaggttctgcc
ttcagcttcctagcctggttgtccctggaccaggatcagttgggtccaattagcaaagac
aagaggaagcagctctacagcttttttacctccgggggaatggggtttgaggcttttatt
agctctgcgggtctgctggtggtagctgtttgcacaaagaaggaatacgtcacagtcatg
ctgcccgacaactgcttctgtgactccctctggcacagtattggtgtggtgcacgtaccc
ggaaagaggccattcgggcagagtctcgtttacatttatgtggatggacagcagaagcta
tctgcccccctcaagtatcccaccatgtctgagccatttacctcctgttgcatcggctca
gcaggccatcggaccacaactccgcctccctcgcagatccctgacccccccatctcatcc
gccacctcacccagcacacgttcctcattgggtagcatcctttcgccacacacctggggc
ggactactgagtgggaagcctgagtctgtgacaaagctcatttcagcagggacccaggac
agtgagtgggggagccccacatctttgcagggtcatctggcgagtgtcatagtgttccat
gaagccctacagcccaaccacatcaaagccctctgtagtgctggtccaaactgtgtgtct
cctttaaaagcccaagagtcagaacttggtgacctttcaagcaaactgctgctgcattat
tcaccaaaggcttgtcaaaacccgatctgtcttgatctttcccccaacaaactgcacgga
cgccttactgggaagaaagttgttaactgggacatcaaggatatgatcaattgcgtaggc
gggctacaagtgctgttccctatactagaacagctgtcactcatgacccctgatcaagcg
aatagtgatgcctcaactgggtcagatttcatcaccccagatgtgaccactccgcctgat
ggagaatgggtcattctcccatcaagcagggcttcagaagcacgtctggagaagaatctg
gtggctaccttcttgttggtgctgaaacattttctacagaggcatgctataaaccaggag
aatctcctccactcgcatggtgtcgctactctgggagctctgctgcagaagcttccagca
ggacacattgatgtcaatgtgcttgtagctatgcagctgctgatagagcaggtgacttat
gagaagaaccagggcctgctgcaacaacttcacacacatctactgttcaacttcaacatt
tggaacaaaggggacttccctctacgtataggccatatacagtacttgaccactgtcatc
aaagacaacaggaagcagttccggaagaaatatggagtccgattccttttggacatcata
cgtctctattatgggaaaaacagtaataaagagagtgacctgagtgaagatgacattgtg
aacatccgtgcatcgctctgcgacctcatcaagtactacatcagcaagggcgtctcccag
gaggaaatgcacagcattattggatacattgccgccattggggacgaagatcagatttgt
ggactcttcgagatgttactcagcctccttcagaacagtccatccagagaccagctcttt
ctgctcctctttgagcccggagcagctgactcctgctatgctcttctgctcaacaataaa
cactctgaccgtcttcgagagcttgtcttcaagctgtttgaacgcatgttgcgatgtgac
cgcatctatgagaaaaacaagcagcgtttgaggctgagggaggcgggctacaacggcctg
tcactactcttttccgatcttcacatcacgccaactctcattcgttgtctcctcaatcag
gtcttgcacacagatcaagtggtgaactacaaggatctaatggcattagttcagctcact
catcgaactggacccagagtacggctcattgtgtgcaagagggtgtaccagcttctccag
tcccaacaagatgctggttgccagatttccaagcagcaatgttggcaagacacgcttgcc
cgactcttcctgcgaggcgaaggctcattgacatcgcgaaatgcagacacagtcagcaac
tgcagcctggacttgaatcaatctagcggaagcaataataaccgcctggaactgccgctg
caccgcaaaacaagggcaagcagtgccgggcgcttggaccgccccgaggacgactggctc
agcatgggcgacaatcgctctgtagacagcctggaaaacggcgatgtcatttcactactg
gacacaccgtcatcttccgcttcagctgagccacaaggccaagtcaagccctggccagtg
gggaaatctgcaggcttgacgcttgatctgtctcatctgcaggcctatgaggccttggag
agtggcagccagacccctggcagtatccacagcacaccctctccatcagatgcaccgaag
ccctttcctggcaactctggagtattagatcagagcgccccattgactgaagacaccttt
ctcttcagtgacaacatctcactcggggagtccctcaataatactgagcgggctgaggaa
gaattgtgcaacatgttgctggacataattcagtgtgtgatgtggcgtggagttgaaggc
tctgacgattcggcatggctggagcgtggccaagtcttttcagcgctcagcaaactggga
acagccaatgagctcctacttcctgttgaccaaatcaaactcggtctcatggaacgtatg
ttggaattggcggtgactgacaatcgtgaggcatctgctgccaccttgcctcaacacacg
gagaacgcagtccgcctacttcacatagtacaagatttcttgcaagctgagggcctgatc
aacccatcgctttggacagagaaggtgctagaggagactgtgacattgatggactgtctc
atggtgtggtattctgctggcacccagtggttccagctttctcaaattggactgagattg
ttgctcggcttcatggcgcaagaggacccagaggtgtgtgcaatagccactgccaagctc
aattttattctccaaatgaaggaagtgtctagccaggatgaggcctgctacctgctgggc
aaggttgagtgcatcctgcggcgctctgtccaggagaaaacagaagaaacatactcattc
ctggttcctctgttgagaacgctcctatccaaagttcaccgcttgctttatatggagcta
catctaccccaactgcctgataccaacggcagcccatctttctttgaggacttccaatta
tactgcaactcacccgagtggcgggtctatctcgacaaatatatcattccgtacatgaag
cagtatgaaatcgagaccttcagtcagggccatgagagtatggcgctctactggaaggag
tgctatgaggccttcatggtcagcctgcataagagagagcgagaaaggggggagagcaag
atctgctttcaggaacactttgttgagccattctcccggcaaagtcgtcaggaaaaccag
agatacaacagtatgttaaagcaacagcatagccagaacagcgcctctctcaggcagtgg
aaggcagctcggcggggccttgtttgtgagagggggccctgggctgaaaggcagccaaag
aggatgcattggaagctgtccagcgcagagaacttttcccgcatgaggctgaaattaatc
cgtaattacaactttgacccttacaaggaggccagtgccctgcgagacaaccttggtgtt
catcatcagtttgtcaacccggaatctctgctgttggaggctgtgaagcaggtcaaagtc
accaacctggaagatgacatcttggagctgccagaggatgatttggcagcagcaaataac
cagattgaagcagaggaagcaggtcaaaaggagaaactgattctgtgggaagactgtcag
ctggtgacagtggtcgacgtggtacccggccgcctggaactcacgacccaacacatctat
ttctacgacagtagccaagagaaggacgaaggtgtgggccatgactttaaatggccactg
agtcagatccgtgaggtccatctacggcgatataatctgcgacgctccgccctggagatc
ttccttattgaccaaaccaactactttctcaacttcaagaaagaggcaagaaataaggtt
tatgaccgcatgttgctcctgcgatccctcagtctgtatggaacacgttctccacaagag
ctccttaaagcctctggattaacacagaaatgggtcaaccgggagatttccaactttgac
tacctgatgcaactcaacacaattgctggccgaacatataacgacttggctcagtatcca
gtgtttccctgggttctggcagactacacctccaaagagctggacctttcggatcccctg
gtattcagggatttgtcaaagccagtggcagtgcaaaacaaccgcaatgctaaagctgtc
cgagaaaagtatgacagctttgaggatccgacaggaactatcgacaagtttcattatggc
actcactactccagtgcagctggtgttatgcactacctgatcagagttgagcccttcacc
tccctgcacatccaactacagagtgggcgatttgactgtgccgaccgtcagttccactct
attccggcaacgtggctgactctcatggacaatcccaatgatgtcaaggagctcatacct
gagttcttctacttcccagagtttcttgagaaccacaatgactttgacctcggtcgccgg
cagataaccaaagaaaaagtaaatgatgtcattctgcccaaatgggccaagtctcccgag
gactttatctataaacaccgcaaagccctggagtctgaatatgtgtcagcacaccttaat
gagtggatcgatctgatctttggttacaagcaaaggggtcccgctgcggtggaagctctc
aatgttttctactactgcacatatgagggagcagtagaccttgatgccatcactgatgaa
aaggaacgaaaagccttggaaggcatgatcagcaactttgggcagacaccctgtcagcta
ctcaaggagccacatccaattcgtctttcccaggaggaagtggagaagaggaaggctatg
ctggactcgtgtcctctggtcatgtttgaacatctcagcaaccttaagtctttttttgtg
gagggcatcagcgataacgtaccactggtcaaagcaattgttccaaagaatcagtcccac
tccttcatcagtcaagggagtccagacacaatggtgacagtaagtcagaactgtctgttt
gggacccatgggtggctgccttacaacaagaacatctccaactacttcaccttcattaag
gaccccacagtgtcccatgccaagacccagcgttttctgtccggaccctttgctcctggt
gtggaggtaacaacaaggctgtttgtggtctcgcacgatggaaagttgctcttcagtgga
ggtcattgggacaacagcctcagagtcacgtcacttgtcaagggcaagactgtcgggcag
cacatccgacacatggatattgtaacctgcctgtcaacagaccactgtggtatccacctc
atctctggctccagagacaccacctgcatggtgtggcaggttctacaacagggtggcgct
ccaataggtctgaaccctaaacctgttcaagtgttgtacggccacacagatgaggtggtt
agtgtttgtatcagcacagagctggacatggctgtgtctggagcacgggatggggtcgta
atcatccacacagtgcgcagaggtcagtacgtacgttgcctgcgaccgccgtgcgacagc
tccttgccgctgtctgtcctccacctggccgtgtcgtgggagggtcacctgctggtccac
acctgcctggagggcaaagcaacactcaaagacaaaaacactctacacctttactctgtg
aatgggaagcacctttgcagtgaacctctgaaggagcaaataactgatatgtgcgtttct
ggggagtttgttgttaccggcagtgagcaaggctacttgtccattcgagacctctacagc
ctctcattgtgcgcggagcccatggccatgcatgtgcctgtacgctgcgtatccgtcact
aaggagcagagtcacatcctgctgggcctacaagacggcaagctgatcatcgtgggcgtg
ggcaagccggccgaggtaaagaactcgctgaggaactacatcgctcagagcctggaggga
tcgccgctcatggcttcccccttgctggccccacttcgagctcgctctcccactcgccta
ctgcaccagcgagaccagctggtgttcagccccacctctgtcatccacaaaccatag
DBGET
integrated database retrieval system
