Syngnathus scovelli (Gulf pipefish): 125987787
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Entry
125987787 CDS
T08785
Symbol
pspc1
Name
(RefSeq) paraspeckle component 1
KO
K24993
paraspeckle component 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125987787 (pspc1)
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125987787 (pspc1)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
RRM_8
RRM_5
Motif
Other DBs
NCBI-GeneID:
125987787
NCBI-ProteinID:
XP_049608228
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All DBs
Position
2:6474409..6478746
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AA seq
522 aa
AA seq
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MADQDVQLANPQSSSPPPPPKSGENSPATEDEQTPTNKGSPAAPAEQLSAAEGSKEAAVE
SAPAPVQMTLDISSFRKPGEKIFTQRSRLFVSNLPLDLPEEEFINLFAKYGNTAEVFINR
ERGFGFIRLESRTLAEIAKAELDGTLLNNRPIRIRIAAHGAALTVRNLLPVVTNELLEQA
FSQFGPVERSIVVTDDRGRPTGKGFVEFASKAAARKALERCTEGALLLTATPCPAIVEPT
EHFDDVEGLPEKMFSITPKYLKERSQTPHFAQPGTFEFEYSSRWKALDELVKQQRDQIDK
SIKEAKEKLEAELESAKHEHQLMLMRHDLMRRQEELRRLEELRNQELHRRKQIELRHEEE
RRRREEEMMRTHREQEELRRQPDTFKPAYQDNREQEMRVADLGPRGAINMADGFNQAPTG
PSANQGQMVNMGGRGNAIIPEATANMSENGNMRGDRYPLSGLLAGRAEVESPKQQQQPAP
QQQPPSTTAQGPPGGPSPMYGGGSPVDGAFDGPNSKRPRYSQ
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaagacgtacagttagcaaacccgcaaagtagcagtccaccgccaccacct
aaaagtggcgaaaattcccctgctacagaagacgagcaaacgccgaccaacaaaggcagt
ccagcggcgcctgctgagcagttgtctgcggctgaaggatccaaagaagccgcggtggaa
agcgctccggctccagtgcaaatgacacttgatatttcaagttttaggaagccaggcgag
aaaatattcacgcagcgttcgcgtctttttgtttccaatctgccgctggatctacccgag
gaggaattcatcaatttatttgctaaatatggaaatacagccgaagtatttatcaataga
gagcgagggttcgggtttattcgtttggagagccgtacacttgcagagattgcaaaagcc
gagctggatgggacgttattaaataatcgaccaatcaggatccgcattgctgcacatggt
gccgcactcactgtgcgcaaccttttacctgttgtcacgaatgagcttttggaacaggcc
ttttctcaatttggcccggtggaacgatctatcgttgtgacggatgaccgtgggcggccc
actggtaaaggcttcgtggagtttgcaagcaaagcggccgcacgtaaagctctggaacgc
tgcacagagggcgccttgctgctaacagccacaccctgcccagccattgtagagcccaca
gagcattttgatgatgtagaaggattgcctgaaaagatgttctcaataactccaaagtac
ctcaaggaacgatcacaaacaccgcatttcgctcagccgggaacatttgagtttgaatat
tcgtctcgctggaaagctcttgacgagttggtgaaacagcagcgagatcagattgacaaa
agtattaaagaagccaaagagaagctggaagccgaactggagtcagcaaaacatgaacat
cagctcatgttaatgaggcatgatctaatgagacgtcaagaggagctcaggcgattggag
gagttgcgcaaccaggagcttcacagacgaaaacagatagagttgaggcatgaggaggag
agaagacgcagagaggaagaaatgatgagaacacatagagagcaggaagagcttaggcgc
caaccagatacatttaaaccagcctaccaggacaatagagaacaggaaatgagagtggct
gatctgggccctcgtggagccattaatatggcagatggctttaaccaggccccgacaggg
cccagcgctaatcagggtcagatggtgaacatgggtggaaggggcaacgccatcatccca
gaggctactgcaaacatgtctgaaaatggcaacatgcgaggcgacagatatccgctgagt
ggcttgttggcaggacgagcggaggtggagtcacctaagcaacagcagcagccggcgccc
cagcagcagccaccgtcaacaacagcacagggccctcctggtggtccgtcacccatgtat
ggaggggggagtcctgtagatggagcgtttgacgggccaaatagcaagcgcccccgctat
tcacagtga
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