Syngnathus scovelli (Gulf pipefish): 125987806
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Entry
125987806 CDS
T08785
Name
(RefSeq) cryptochrome-1
KO
K02295
cryptochrome
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
ROQ_II
Motif
Other DBs
NCBI-GeneID:
125987806
NCBI-ProteinID:
XP_049608262
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Position
2:13999708..14012652
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AA seq
643 aa
AA seq
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MAPNSIHWFRKGLRLHDNPALKEAVQGAGTVRCVYILDPWFAGSSNVGVNRWRFLLQCLE
DLDAKLRKLNSRLFVIRGQPANVFPRLFKEWKISRLTFEYDSEPFGKERDAAIKKLAMEA
GVKVIVKNSHTLYDLDKIIELNSGQPPLTYKRFQTLISRLDPPEMPVETLSDSLMANCIT
PILEDHGDKYGVPSLEELGFDTEGLPTAVWPGGETEALTRLERHLERKAWVANFERPRMN
ANSLLASPTGVSPYLRFGCLSCRLFYFKLTDLYRKVEKNSSPPLSQYGQLLWREFFYTAA
TNNPRFDKMEGNPICVRIPWDKNPEALAKWAEAKTGFPWIDAIMTQLRQEGWIHPLARHA
VACFLTRGDLWISWEEGMKVFEELLLDSDWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGR
RIDPNGDFIRRYLPVLRAFPAKFIYDPWNAPESVQAAAKCVIGVNYPKPMVHHAEASRLN
IERMKQIYQQLSRYRGLGLLASVPSTNGNGNGGMMAYSPGEQQQGTNRSNNNTPHMAGVS
GSSVVTGNGSGSILLNFDSEKQPGQRRQMAPQHGNHTVPENNTAVTSGKLYHEFAVPQHP
GLAHIRGSMTGKREREIEREGSGEEDPSSCSGHKMQRQSTETT
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaattccatccattggttccgcaagggactccgtcttcatgacaacccagct
cttaaggaggcagtccagggggcaggcacagtgcgctgcgtctacattttggacccttgg
tttgcaggctcctccaatgttggggtcaacaggtggaggtttcttctccaatgtttggag
gatctggacgccaagctccggaagctaaactcccgcctttttgtcataaggggccaacca
gccaatgttttcccacgactctttaaggagtggaagatctcgcggttgacctttgagtat
gactcagagccttttggaaaggaaagagatgctgctatcaagaagctggctatggaggca
ggagtgaaagtcatcgttaagaactcacacacgctgtatgacctggacaagattatagaa
ctgaacagtggccaaccaccgcttacatacaagcgtttccagacactgatcagtcgcttg
gatcctcctgagatgcctgtggagacgctgtcagacagcctgatggccaactgcatcacc
cccatcttggaggaccacggagacaagtatggggttccatccttggaggagcttggcttt
gacaccgagggcctgccgacagctgtgtggccaggaggagagactgaggctctaaccaga
ttagagcgccatttagaaagaaaagcatgggtggcaaactttgagcgtccaaggatgaac
gccaactcgctactggccagcccaacgggcgtcagcccttatctacgtttcggctgcctc
tcctgtcgccttttctacttcaagctcacagatctctatcgcaaggtggaaaagaacagt
tcccctcctctctcacaatatggacagctactgtggcgtgaattcttctacacagcggcc
accaacaatccgcgctttgacaagatggaggggaaccccatctgtgttcgcattccctgg
gacaaaaaccccgaggcgctcgccaagtgggctgaagccaagaccggcttcccctggata
gacgctatcatgactcagctgaggcaagagggctggattcatcccctggctcgccatgct
gtggcatgcttcctcaccagaggcgacttgtggatcagctgggaagaagggatgaaggtt
ttcgaggagctgcttcttgactccgactggagtgtgaatgcgggcagttggatgtggctg
tcctgtagttcctttttccagcagtttttccactgctactgccctgtgggcttcggtcgg
cgcatcgaccccaatggtgacttcatcagacgttacttacctgtcttaagagcttttcct
gccaagttcatatacgacccatggaacgcgcccgagtcagtacaagcggccgccaagtgc
gtcattggcgtgaactacccaaaaccaatggtgcaccacgccgaggccagtcggctcaac
atcgagaggatgaagcaaatctaccagcaactgagccgatacagaggactaggtctgctt
gcatccgttccatccacaaatggcaacggaaatggaggaatgatggcctactcacctggt
gaacaacagcaggggaccaaccgaagcaacaacaacaccccccacatggctggcgtgtcg
ggcagctctgtcgtcacaggcaacggcagcgggagcatcctccttaactttgacagcgag
aaacagccggggcagcgacgacaaatggcgccgcagcacggtaatcatacagtgcccgaa
aacaacacagcggtcaccagtggcaaactgtaccatgagtttgccgtgcctcagcaccca
ggacttgcacacatcagaggcagcatgacaggaaaacgcgaacgggagatagaacgcgag
ggttcaggggaggaagacccgtcgtcctgctcgggtcacaagatgcagaggcaaagtaca
gagaccacctaa
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