Syngnathus scovelli (Gulf pipefish): 125987810
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Entry
125987810 CDS
T08785
Symbol
nsun5
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sscv03009
]
125987810 (nsun5)
Enzymes [BR:
sscv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
125987810 (nsun5)
Ribosome biogenesis [BR:
sscv03009
]
Eukaryotic type
Other ribosome biogenesis factors
125987810 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
FtsJ
DUF7117
RsmF-B_ferredox
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
125987810
NCBI-ProteinID:
XP_049608268
LinkDB
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Position
2:complement(15612556..15615492)
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AA seq
500 aa
AA seq
DB search
MALYTKAAEILDKVDKQQGALKTLVYESKFANIKQLFALVCQTQKFSSILEDIIASTKLL
KYTKLKMPLAKVLVFDLLMGQGLKCGGSWKALLMKHRSRLQTELALMKVKRKVSRNEDLL
ASNIKDPVGDQLPRYARVNVLKTTMEDTVDYLKREGFTYKGEASKLDDLSLTAREFVKDL
HLPEVLVFPPKTDFHDHFLYKAGHIILQDKASCLPAFLLNPPPGSHVIDACAAPGNKSSH
LAAIMKNRGRLFAFDLDAKRLATMSTLMLRAGVTCHQLANQDFLKVDPESKLYGGVEYIL
LDPSCSGSGMVCLQDRTTADPQKDASRLASLASFQLRCLNHGLRFPRLKRLIYSTCSVHS
QENEEVVTACLQQNPGFRLVPLLPDWPERGLPPLSQCLRASVNGMRTHGFFVALLERCNE
AENLMPQLTLQTRHPEMTVTCLPACEKTPEAAPSPNQSEPSECEDKAMTSEDGKLGEKMT
KKRRRKRKKKGKSVITESKD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtacacgaaagccgctgagatcctggacaaggtggacaagcaacagggtgct
ctcaaaacgctggtgtatgaaagtaaattcgccaacatcaagcagctcttcgctctcgtc
tgccagacccagaaattctcgtccatcttggaggacatcatcgcgtccaccaagctgctg
aaatataccaagttgaagatgcccctggccaaggttctagtcttcgacctgctcatgggc
caaggcctcaagtgcggcggctcctggaaggcattgttgatgaagcatcgctccaggctg
cagacagagctggccctcatgaaagtcaagcgaaaggtcagcaggaatgaagacctcctc
gccagtaacatcaaggatcccgttggtgaccagttgcccaggtatgcgcgtgtcaatgtc
ctaaagaccacgatggaggacactgtggactacctcaagcgggagggcttcacctacaag
ggggaggcctccaagttggatgacttgagcctcacggcaagggagtttgtgaaggacctt
cacctgccagaggtgctggtcttcccgcctaaaacggacttccacgaccacttcctgtac
aaggccggccacattattcttcaggataaagccagctgcctccccgcctttctactcaat
ccaccgcctgggagccacgtcattgatgcctgtgctgccccggggaataaaagcagccac
ctggccgccatcatgaagaacagaggccggctgtttgcctttgatttggatgccaagcgt
ctggccaccatgtccaccctcatgctgcgagccggcgtcacttgtcatcagctggccaat
caggacttcctcaaggtggacccggaaagcaagttgtacgggggcgtggaatacatcctg
ctcgatccctcttgcagcggttcaggcatggtgtgtctccaggaccgcacgactgccgat
cctcaaaaggacgcatctcgtctggcttcgctggcctccttccagctgcgctgcctgaac
cacggactccggttcccccggctgaagcgcctaatctactccacttgctctgtccacagc
caggagaacgaggaggtcgtaacggcctgtcttcaacagaaccccggcttcaggctggtg
ccactgctgcctgactggcccgaacgaggcctgccacccctatctcagtgtctccgggca
agcgtcaacgggatgcgcacgcatggattctttgtggctctgctggagcgttgcaatgaa
gctgagaatctgatgccacagctaacgctacagacaaggcatcccgagatgacggtgacc
tgcctgcctgcctgtgagaagacccctgaagccgctcccagtcccaaccagtctgaacct
tcagagtgcgaggacaaagcaatgacctctgaagatggcaagctaggtgagaagatgacc
aaaaagagaaggaggaagcggaagaagaaaggcaaaagtgtgataacggaatcaaaagac
tga
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