Syngnathus scovelli (Gulf pipefish): 125987815
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Entry
125987815 CDS
T08785
Name
(RefSeq) serine/arginine-rich splicing factor 6
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040
Spliceosome
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125987815
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125987815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125987815
Spliceosome [BR:
sscv03041
]
Common components
Common spliceosomal components
SR proteins
125987815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
125987815
NCBI-ProteinID:
XP_049608276
LinkDB
All DBs
Position
2:complement(15645179..15650798)
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AA seq
350 aa
AA seq
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MPRVYIGRLGYHVREKDVQRFFGSFGKLLEVDLKNGYGFVEFEDNRDADDAVYELNGKDL
CGERVIVEHARGPRRDRDSYGGGSWGDGRSSSYSSRSRTGRDKYGPPVRTEYRLIVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSHSDMKRAIDKLDGTDINGRKIRL
VPDKPRRPRSYSGSRSRSRSRRRSRSRSRRSRSSRSRSRSKSRSGSRSHKRARKSRSKSG
ESKSRSRNRKSRSRSKSPSRSPKQKSKSRSKSRSKVKSERDSRSPSKEKADEKSRSRSAS
PVENGNDEREAKSASRSPSPRENDRNSPSRERRSASRSRSRSRSRSASQD
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgtttacattggacgacttggctaccatgtccgcgaaaaggacgtccagcgg
tttttcggcagctttggcaagctcttggaagtggatttaaaaaacggatacggtttcgtg
gagtttgaggacaaccgggatgccgacgacgccgtgtacgagctgaacggaaaagatctg
tgcggcgagagggtgatcgtcgagcatgcccgcgggcctcggcgtgaccgggacagctac
ggtgggggttcctggggtgatggccgcagtagcagttacagcagccgaagccgcacagga
agggacaagtacggaccccccgttcgtaccgaataccgtctgattgtggaaaacttatcc
agccgctgcagttggcaggacctcaaggatttcatgcgtcaggcaggtgaggtcacttac
gctgacgcccacaaggagcgtgccaatgagggagtgatcgagttccgtagccattcagac
atgaagcgggctattgacaagttggatgggactgacatcaatggcagaaagattcgtctg
gtgccggacaagccccgcaggccaaggtcctactctggcagccgttccagatctcgtagc
cgccgccgttcccgcagcagaagccgtaggagcagaagctctagaagtcgctccagatcc
aaatctcggtctggttcgcgcagccacaagagagcaaggaagtctcgctccaagtctggc
gagagcaagtcacgctctcgcaaccgcaagtcccgttcgcggtccaaatccccatcccga
tcccccaagcaaaaatcaaaatcccgctcaaagagtcgctccaaggtgaagtctgagcga
gattcccgttccccgtccaaggagaaagctgatgagaagtcccgcagtcgctctgcctcc
cctgtagagaatggcaacgatgaacgagaggccaaatccgcatcccgctcgccttcaccg
cgtgagaatgatcgcaattccccatccagagagaggcgttcagcctcccgctcaagatct
cgttcgcggtctagatcagcttctcaggattag
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