Syngnathus scovelli (Gulf pipefish): 125987830
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Entry
125987830 CDS
T08785
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125987830
Membrane trafficking [BR:
sscv04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
125987830
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Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_10
TPR_1
TPR_8
TPR_7
TPR_16
Motif
Other DBs
NCBI-GeneID:
125987830
NCBI-ProteinID:
XP_049608312
LinkDB
All DBs
Position
1:24802417..24811227
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AA seq
740 aa
AA seq
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MEKSRRQSRLGVAATLKGTSDENLPTALPVRLDAVTGHERLPAHEESQEMLRGKLRTQQA
DSTELSTLIEELSAHLVAIDREDQVIFVTFQTFEEVWMFATHYTLGRLGHCMELLLFDKE
LWLLSLENHLGIKVSVPEDTLHVLYTCVLMEEASVFARCTASRMFDSCTSRPDLYLEQGD
VALFEPPFRNSGWTVLCLSDGSRGTGAKPALEPVIPFHRWFLKSCPEKILVGDGKPARDF
PMLFVHNVQPSVGLRVLDSVLAALPECCATPLEGLVLNMRGVGLRCMGDLRRAAESYHAA
VAICQENKDVPNRAIALANLGLLCLKAGAKGVARKHLMESVRLFSSLDGGHETTFVAVLL
RLGQHWVNERRMHFGKGCYEWALLLAIKANLPDCQLMAVRRLCHFYEWESPDRARRVIYS
QYQVRLLQGTPDREREGDTLEAISQLFLSLATQRAYRAALDHTKSSLAIFIDLGLSEKEA
YGWLQAGKIYHLLGQAELVELYVQVALNVALSTGDNKFILKMQEAAGDIFFNSRHDQDKA
IIYYTGYDGALPMADRCGAVSSRLRLCNKLAEVMFQLQLYGEALEFAHSALEISVKLGEV
LNERVAYHRLASLYHRLGQCELAEHYYLKTLSLCPAPLQFDEEALYYARVYRTLGDILFY
DLKDPFDAAGYYHFALAAAMDVGNKKWQLVLCTRLATLYHNFLMDRQLSLSFYKRSRGLA
AELNVRRMNTAADRANVPVY
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagcagacgacaaagtcgacttggtgttgctgccactctgaagggaacatct
gacgagaaccttccaacagctctgcccgtgcgcctggatgcggtcacgggtcacgagcgt
cttcctgcacacgaggagtcgcaggaaatgctgcgagggaaactgcgcactcagcaggct
gacagcactgagctcagcactctcattgaggagttgtctgctcacctcgttgccattgac
cgtgaagaccaagtgatttttgtcacgttccaaacattcgaggaagtgtggatgttcgca
acgcactacacacttggccggcttggtcattgcatggagcttttgttgtttgacaaggag
ttgtggctcctctccttggaaaaccatcttggaatcaaagtttccgttccggaggacact
ctacatgttctctacacgtgcgtcctcatggaagaagcgtcagtgtttgctcgctgcacc
gccagtcggatgtttgatagttgcacctccagacccgacctgtacctggagcagggagac
gtcgcgctctttgagcctcccttccggaactcgggctggacagtcctttgcttgtccgac
ggctcccgaggcaccggggccaaacctgcgctggagcctgtgataccttttcatcggtgg
tttctcaagtcttgtccagagaagattttggtgggtgatggcaaaccggcccgtgacttc
cccatgctcttcgttcacaatgttcaacccagcgtgggactgcgcgtcttggactcggtc
ttggcagctttgccggagtgctgcgccacgccgctggaagggttggtgctcaacatgcgc
ggcgtgggtctccgttgtatgggtgaccttcgcagggcggcagagagctaccacgccgct
gtggccatctgccaggagaacaaagacgtgcccaaccgagcgatagcgcttgccaacctc
ggcctgctgtgtctcaaggccggagctaaaggagtcgcacggaagcacctgatggagtcc
gtgcggctcttttcctcgctggacggagggcacgagacgacctttgtcgccgtgctcctg
cgcctgggtcaacactgggtgaacgagcggcggatgcattttgggaaaggatgctacgag
tgggctttgctgctggccatcaaagccaacctcccagactgccagctgatggcggtaaga
cgtctgtgccacttttatgagtgggagagtccggaccgggcccggcgcgtcatctacagc
cagtaccaggtccgactgcttcaagggacacccgaccgagaacgggagggtgacacattg
gaagccatcagccagctcttcctctcgctggccacgcagagggcctatcgcgcagctctc
gaccacaccaagagcagtctggctattttcatcgacctgggcctgagtgagaaggaagcg
tacggatggcttcaagctggcaagatctaccacctcctcggccaggcggaactggtggaa
ctttacgtacaggtcgcactgaatgtggctctgagcacaggagacaacaagttcatcttg
aagatgcaggaagctgctggagatatcttcttcaacagtcgccatgatcaagacaaggct
atcatctactacacagggtacgatggcgctcttcccatggcggacaggtgcggcgccgtt
tcgagcaggctgaggctgtgcaacaagctggcagaagtcatgttccaactacaactatac
ggagaagccttggaatttgctcacagcgctctggagatcagcgtcaagctaggtgaggtc
ctgaacgagcgagtggcctaccatcgtctggcctccttgtaccaccgtttaggtcagtgc
gaactggctgaacactactacctgaagactctgagcctctgcccggcccctctgcagttt
gacgaggaagccctctactacgccagggtataccggaccttgggggacatccttttctac
gatctgaaggacccttttgacgcagcgggctactaccattttgccctggccgcagccatg
gatgtgggcaacaagaagtggcagctggtgctgtgcacccgcctggccaccctctaccac
aacttcctcatggaccgccagctctcgctttctttttacaagcgatcccgaggcctcgcc
gcggagctcaacgtgaggaggatgaacacggccgcggaccgcgccaacgttccagtttac
tag
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