Syngnathus scovelli (Gulf pipefish): 125987895
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Entry
125987895 CDS
T08785
Name
(RefSeq) nuclear receptor subfamily 1 group D member 1-like
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125987895
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sscv03310
]
125987895
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125987895
Nuclear receptors [BR:
sscv03310
]
1. Thyroid hormone like
1D. Rev-Erb
125987895
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125987895
NCBI-ProteinID:
XP_049608415
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Position
2:2929213..2938253
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AA seq
538 aa
AA seq
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MDNSPGGGGGVILYAGSSGSSSPSPGSPSSGYQTHSQPSSPENVTFTEIGAMKERSDGSA
SPTSKVRFGEVYGGSPAPQQTYAHLIGGKRPSCAFHGTFTKNGGMVLLCKVCGDIASGFH
YGVHACEGCKGFFRRSIQQNINYKMCVKNEKCLIMRMNRNRCQHCRFKKCMSVGMSRDAV
RFGRIPKREKQRLLDEMQSYMKSLNESAAMDMDSSSSSPSVNENLTSHDDGGSKEAIGAI
SRAYQDIFSGRERSAKRAKLSNKDVSRDCGSRQVSGQANYAQSCPLEDNPLPFHKMDNAY
LASTDPTHRPSVDTLHRCPKAGNASNQPSCPWKLAPGAKVLACPLNACPVSGQERSSQDI
WESFSQCFTPAVKEVVEFAKGIPGFQELSQQDQVMLLKSGTFQVLMVRFSNLFNAAEHTV
TFLNGQTYPLSTLRALGMGSLLNAMFDFSEKLASLGLEPDEMALFMAVVLVSADRWGISD
APAVEQLQEGLIRALRSLLARRHPDDTSLFSKLLLRLPDLRTLNNLHSDKLLAFRIDP
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacaacagcccaggaggtggcggtggagtcatcctatatgcaggctcctccggaagc
tccagccccagcccggggagcccttccagcggctaccagacacactcgcagccctcgtcg
ccggagaatgtgaccttcacagaaatcggggcgatgaaagagaggtcggacgggtccgcc
agtccgacctcaaaggtccgcttcggcgaggtctacggcggttctcctgcaccgcagcaa
acctatgcacatctgattggtgggaaaaggcccagctgtgctttccatggaacttttact
aaaaatggtggaatggttctgctctgcaaggtctgtggtgacattgcgtccggtttccac
tacggcgtgcacgcatgtgaaggatgcaagggttttttccgccgcagcatccagcagaac
atcaactacaagatgtgcgtgaagaacgagaagtgtctgatcatgcgtatgaaccgcaat
cggtgccagcactgtcgcttcaagaagtgcatgtccgtcggaatgtcacgagatgctgtt
cgttttggccgcatcccgaaaagagagaagcaacgacttctggatgagatgcagagctac
atgaagagcctcaatgagtccgccgccatggacatggactcctcctcctcttccccctcg
gtgaacgagaatctcaccagccacgatgacggcggctccaaggaggccatcggggctatc
tccagagcctaccaggacatcttcagcggccgggagaggtcggccaagagggccaaactc
tccaacaaggacgtttctcgagattgcggttcccgtcaggtttctggacaagccaactac
gcccagtcttgcccacttgaagacaacccgcttccattccacaagatggacaacgcatat
ttagcgtcaaccgatccaactcatcggcccagcgttgacactctgcatcgttgtcccaaa
gcggggaacgcatcaaaccagccctcctgtccgtggaagttagctccaggagctaaagtg
ttggcgtgtcctctgaacgcgtgccccgtatctgggcaggaacgcagcagtcaggacatc
tgggagtccttttctcagtgtttcactcctgcagtcaaggaagtggtggaattcgctaag
ggcattccaggatttcaagagcttagccagcaggaccaagtcatgctgcttaaatcggga
accttccaggttcttatggtgaggttcagcaacttgttcaatgctgcagaacatacggtg
accttcctgaacggtcaaacgtatccactgtccaccttacgtgctttggggatgggttcc
ctactcaatgccatgtttgacttcagtgagaagctggcctccttgggtttggagcctgat
gaaatggccctcttcatggctgtggtgttggtctcagcagatcgttggggcatctcagac
gcgccggctgtggagcagctccaggaggggcttatccgagcactacgctcgctcctcgcc
cggcggcatccggatgacacgtcgctcttctccaaacttcttctgcggctgccggacctg
cgcaccctcaacaatctgcactctgataaacttttggcctttcgtattgacccttga
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