Syngnathus scovelli (Gulf pipefish): 125987918
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Entry
125987918 CDS
T08785
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125987918 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125987918 (nfascb)
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
L1 family
125987918 (nfascb)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
125987918
NCBI-ProteinID:
XP_049608473
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All DBs
Position
2:105268..113594
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AA seq
1186 aa
AA seq
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MATRVQAAAGAALLMLLAQSAWPVDIPLEIRQPPTITKQSTKEHIVDPKDNMVIECEAEG
NPHPIFSWRRDGKYFNVARDPQVTMRRRSGTLDISARNDPQQYEAEYQCIASNQYGSAYS
DKIRVRLYRAPVWPREIVEPVVISAGSPLVLACDPPAGPPKPDTYWMSSCSYARPFNWPI
QTAFPSMRAVRQDHRVSAGLNGDLYFSNVLLNDSASDFCCSARFPYKNAIQQKMPVVVKV
VSTRAVEEAAPTWLSPTGSSSSVLVLLGEERLLECIAAGVPTPHISWTKNGEDLAESPRL
KLRHFNKMLRMPKVGFEDAGEYVCTATNKMGSIQHTFAVTVKAAPFWLEKPRHLVLAPEE
SGRLVCRVDGAPHPTVSWFINGEPIEGAAAAQANRRVSGDTLSLSSVTAADTAVYQCNAS
NPYGYVLANAFVNVLHATPRILGARNEVIKVVEGRGAFLDCRYFGSPLPDLRWSKYGQGT
LEGNRFKTHSNGTLEIRRTQIEDQGTYACAVSNVAGRDETQVRIEVKEPTLILKRPQDTR
VIRGSEVRLECAAKADATVPITTAWMKDAKSVSLGRRIWLDESNLVLGNVNRGDAGVYTC
HIENELEQKSASARLMVLDYPDAPTKLELSDPYERSVRLTWVPGDSNFSPITEYLVQYDD
DDWLPGKWKNLSTYPGSLNSVILHLTPFTYYQFRVIAVNQIGASRPSRPSVRFQTSGAPP
DVIPKNVKGVGTWGNNMEISWEPLTYREWNGPHLKYLVWWRRRDSREEWKNATTKWLKYY
IYDADTFTPYELKVQAVNDFGLGPESPVVIGYSGEDRPVSAPQNPRLSDIQATRATVRWD
PVPQSSLMGQLKEYKVYYWRDSSQLRWLRVSRATRSRAFAETGPEPSGLLTDLLPYSNYK
MYMVVANGRYEGPPSNYVHFSTPEGVPSAPTSFRIRQRHLDSIYVDWEPPAEPNGIISGY
SLKYQTVNASRGEEQRVEEFPPNVTSFSLRRDDRYTRYRFSVAARTRLGLGPWHTEESPH
YTTEIYAQDQVDVSTKGWFVGVMCAVALVVLTLLVVCFVKRSRGGKYPVREKKATALEAV
DDVDQDGSFDYRSSLERLARVTALPYPRWEEERGLQRGPPSKEAVMKRCESDDSLVDYGD
GGGEVPFTEDGSFIGQYTAPRRDVRDLDFGGSLELHSPLNAIYSLA
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggccacccgggtccaagcggcggcgggggcggcactcttgatgcttttggcccaaagc
gcttggcctgtggacatccctctggaaatccgccaaccgccgaccatcaccaagcagtcg
accaaggagcatatcgtggaccccaaggacaacatggtgattgagtgcgaggccgagggc
aacccgcatcccatcttctcttggcggcgcgacggcaagtacttcaacgtggcgcgcgac
ccgcaggtgaccatgcgcagacgctcagggacgctggacatctcggcccggaacgatccg
caacagtatgaggcagaataccaatgcatcgcctccaaccagtacggctcggcgtactcc
gacaagatcagagtgcgactctacagggctcccgtgtggccgagggagatcgtggaaccg
gtggtgatcagcgccggctcacctttggtgctggcctgtgaccctccggcggggccgcct
aaacctgacacctactggatgtccagctgctcctacgccagaccctttaactggccaatt
caaacagcgttccccagcatgcgcgccgtgcggcaggaccatcgggtgtcggcggggctc
aacggggatctctatttctccaacgtgctgctcaacgactcggcctccgacttctgctgc
agcgcccgcttcccgtacaagaacgccatccagcaaaagatgccggtggtggtcaaggtc
gtcagcacccgagcagtggaggaggccgccccgacctggttgtctcctacaggttcatcc
agttctgttctggtcctgctgggagaggagcgactgctggagtgtattgccgcaggagtg
cccacacctcatattagctggaccaagaacggtgaggacttggcggagagccctcgcctg
aaactccgacacttcaacaagatgcttcgaatgccaaaggtgggctttgaggacgcaggc
gagtacgtctgcaccgccaccaataagatgggctccatccagcacacctttgccgtcacg
gtcaaagcggcgccgttctggttggaaaagccccggcatttagtcttggctcccgaggaa
agcgggcgcttggtgtgccgcgtcgacggcgctcctcatcccacggtcagctggttcatc
aacggcgagcccatcgagggcgccgccgcggctcaagccaacagacgggtgtcgggagat
actctgagcctcagcagtgtgacggcagcagacacggccgtgtaccagtgcaacgcctcg
aacccgtacggctacgtattggccaacgcctttgtcaacgtcctgcatgcaacgccccgc
atcctcggggccaggaatgaagtcatcaaggtggtggagggacgtggtgcctttttggac
tgccgctactttggctctccgctgcccgacctgcgatggtccaaatacggccaggggact
ctggaaggaaatcgctttaagacgcatagcaacggcaccctggagatcaggcgcacgcag
atagaggatcaaggaacatacgcgtgtgcggtcagcaacgttgcagggcgagacgagact
caagtccgaattgaggtcaaagaacccaccttgattttgaaaaggccgcaggataccaga
gtgatccgtggaagcgaggtgcgtttggagtgtgccgccaaagcggacgcaaccgttccc
atcaccaccgcttggatgaaggacgcaaagtccgtctcacttggccggagaatatggctg
gatgaatccaatctagtcctcggcaacgtaaacagaggtgacgccggcgtctacacgtgc
cacattgaaaacgaactggagcagaagtctgcgtcggcgcgcctgatggtgctggactac
ccggatgcgcccacgaaactggagctgtcggatccgtacgaacggagcgtgagacttact
tgggtccccggggacagcaacttcagccccatcacggaatacttggtccaatatgatgac
gacgactggttacctggaaagtggaagaacttgtcgacgtaccccggaagcctcaactca
gtcattctgcacctgacaccttttacgtactaccagttccgcgtcatcgccgtcaatcaa
attggtgcgagtcgcccgagtcgtccgtcggtgcgattccagaccagcggagcacctccg
gacgtcatcccaaagaacgtgaaaggagtcggaacgtggggaaacaacatggagatcagc
tgggagcctctgacataccgggagtggaacgggccgcacctcaagtatttggtctggtgg
cggagacgcgactccagagaggagtggaagaacgccaccaccaagtggctcaagtattat
atctacgacgcggatacgttcacgccctacgagctgaaggttcaggccgtcaatgacttt
ggcctgggcccggagtctcccgttgtcatcggttactccggggaagaccgtcccgttagc
gcgccgcagaacccgagactgtcggatattcaggccacccgggcgactgtgcgctgggac
ccggtgccgcaaagctcccttatgggccaactgaaagagtacaaggtctactactggagg
gacagcagccagctgaggtggctgcgagtcagcagagccaccaggtcccgagccttcgca
gaaaccggtcccgagccttcggggctcctcaccgacctgctcccctacagcaactataag
atgtacatggtcgtggccaacggtcgctacgaagggccgcccagcaactacgtccacttt
tccacaccggaaggagtcccatcggctcccacatccttcaggatccgccagcgacacctt
gacagtatctatgtggactgggagccaccggcggaacccaacggaattatcagcggctat
tccctcaagtaccagacagtgaacgccagcaggggagaggagcagagagtggaagagttc
ccgccaaacgtcaccagtttctcgctgcgccgagacgaccgctacacccgataccgcttc
tctgtggccgctcggacccgactgggtttgggcccgtggcatacggaggagtcgccgcac
tacaccaccgagatctacgcccaggatcaggtggacgtctccaccaagggctggttcgtc
ggcgtcatgtgcgccgtggccctcgtggtgctgacgctgctcgtggtgtgcttcgtcaag
agaagccgagggggcaaatacccagtgcgggaaaagaaagccaccgccttagaagctgtg
gacgacgtggatcaagacggctccttcgactatcgcagctctctggaaaggctggcccgt
gtcactgctctgccctacccacgctgggaggaggagagggggcttcagagaggaccacct
tcgaaggaagccgtgatgaaaaggtgcgagagcgacgatagcctggtggactacggagat
ggcggcggagaagtgcccttcactgaggacggctcgttcattggccagtacacggcgcca
aggagagacgtgagggacttggactttggcggcagtttggagcttcattctccactgaac
gccatctactcgctggcttga
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