Syngnathus scovelli (Gulf pipefish): 125987951
Help
Entry
125987951 CDS
T08785
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03420
Nucleotide excision repair
sscv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125987951 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
125987951 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125987951 (cul4b)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125987951 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125987951 (cul4b)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
125987951 (cul4b)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
125987951 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
125987951 (cul4b)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125987951 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
125987951
NCBI-ProteinID:
XP_049608581
LinkDB
All DBs
Position
1:11682438..11694747
Genome browser
AA seq
861 aa
AA seq
DB search
MFPTGLSSPNPPPPPTQEARAAATNVKNDSGNIISSKKRKINGSEREETSDTISPSPPKT
LTSSSSASSSPVHIQKKLRFEDSVDFIGLDVKMAEEAAAASCSNNKSKAVLLAAGVGGHH
ANGLTKSVASSGTFSNSKPGAAKKLVIKNFKEKPKLPENYTQETWQKLKEAVEAIQNSTS
IKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREGALDSVLFLKKIDKC
WQDHCRQMIMIRGIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGILL
LIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPE
YLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLTHLLDENRIQD
LSLLYQLFSRVRSGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDV
CFMKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIMI
IFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDM
ELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYIPMEVHLPAEMVRLQEIFKTFY
LGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKLATG
IEDGELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDEFKHRLFRIKINQIQMKETV
EEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPADLKKRIES
LIDRDYMERDKENPNQYNYVA
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatcttcccctaaccccccaccaccgccaacccaagaggcaaga
gcagcggctactaatgtcaaaaacgacagcggcaacattatatcttcgaagaagaggaaa
ataaacggctccgagagggaagagaccagcgacactatctccccttcgcctcccaagacc
ctcacttcctcctcgtccgcctcctcgtcgccggtgcacatccagaagaagttgcgcttc
gaggactccgtggacttcattgggctggatgtgaaaatggccgaggaggctgctgctgct
tcgtgctccaacaacaaaagcaaagctgtgctcctggctgccggcgtggggggccaccat
gccaacggactgaccaagagcgtggcgagttccgggaccttctccaacagcaagcccgga
gccgccaagaagctagtcattaagaatttcaaagaaaagcccaagttgccagagaactac
acacaggaaacatggcagaagctgaaggaggcagtagaggccattcagaacagcacatcc
atcaagtacaacctagaggagctgtaccaggctgttgagaatctgtgctcccacaaaatc
tctgccaagctttacaaacagctgagggccgtgtgtgaagatcacatcaaggcccagatt
gatcaattcagagagggtgccctggacagtgtactcttcctgaagaaaatagacaagtgc
tggcaggatcactgcagacaaatgataatgatcaggggtatatttttatttttggaccgt
acctatgttttacaaaactctatgctgccatcaatttgggacatgggtctggagctcttt
aggttctacattatcagcgacctgaaggtccagagtaaaaccattgatggtattctgctc
ctcatcgaaagggagcgtaacggcgaggcgatagaccgcagtctgctgagaagcctattg
agcatgctctctgacttgcagatttatcaagactcctttgagcagcgttttctggaggag
acaaatcgcctgtatgctgcagaaggccagagactgatgcaggagcgagaggtacccgag
tatttgcaccatgtcaacaaacgcttggaagaggaggcagaccgagtcattacctattta
gaccagagcacacaaaaacctcttattgccacagtggagaagcagctgctaggcgaacat
ctcactgcaactttgcagaaagggctgacacacctgctggatgaaaataggattcaggat
ctgtctctcctctatcagctcttcagcagagtgcgaagtggtgttcaagtcctcctgcaa
cactggatagagtacataaaggcgttcgggagcacaattgtgattaaccctgaaaaagac
aagacaatggtgcaagagttgctagacttcaaagacaaggtggaccatatcatcgatgtg
tgctttatgaaaaatgagaagtttgtgaacgccatgaaggaggctttcgaaacattcatc
aacaagcggccaaataagccagcagagctcatagccaaacatgtggattctaaactgcga
gctggaaacaaagaggcaacagatgaagaattggaaaagatgttggataagataatgatt
atatttagatttatctatggtaaagacgtttttgaggccttttacaagaaggatctggcc
aagaggttactggttggaaaaagtgcttctgtggatgctgaaaagtcaatgttgtccaaa
ttaaaacatgagtgtggggcagcattcaccagcaaactggaggggatgttcaaagatatg
gagctttcgaaagacattatggtgcagttcaaacagtatatgcagtgccaaaacatcccc
ggtaacatcgaactgactgtgaacatcctcacaatgggctactggcccacttacatcccc
atggaagtgcatcttcctgcagagatggtgcgcctgcaagaaatcttcaagaccttctac
ctgggcaaacacagcggcagaaaactgcagtggcagtcgacacttggccactgtgtctta
aaagctgaatttaaagagggcaagaaggagctgcaggtgtcacttttccaaactctagtg
ctgctgatgttcaatgaaggggaggaattcaccctggaggagattaaactggcgacagga
atagaggacggtgagctgcgtcgcactctgcagtcactggcatgtggcaaagcgcgtgtc
ctcaccaaaatcccaaaaagcaaagatgtggaagatggagataagttctcctgcaatgat
gaattcaaacacaggcttttccgcatcaaaataaatcagatccagatgaaagagacggtg
gaggagcaggccagcaccacggagagggttttccaggatcgacagtatcagattgatgct
gccatcgtgcgcatcatgaagatgagaaaaactctgagccataaccttctcatgtcagag
gtgtacaaccagctcaagttccccgtcaagcctgctgacctaaagaagaggatagagtct
ctcatcgacagagactatatggagcgtgacaaggagaatcccaaccagtacaactatgtg
gcttag
DBGET
integrated database retrieval system
