Syngnathus scovelli (Gulf pipefish): 125987994
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Entry
125987994 CDS
T08785
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125987994 (apex2)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
125987994 (apex2)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
125987994 (apex2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
125987994
NCBI-ProteinID:
XP_049608643
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Position
2:complement(8137700..8140581)
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AA seq
515 aa
AA seq
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MKLVTWNINGIRTFGCGIKKALDALEADIICVQETKVTRDLLDARTAIVDGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTNHAGAVGCYGNQSEFTDEELQLLDNEGRAV
ITQHRVQHSDKIQTVTVINVYCPRADPEKPERKEFKLQFYKLLQARAEAILKNGSSVIVL
GDVNTSHRPIDHCDPNEIDDFEDNPGRKWLNSFLRDNKASPSADFSHDGKFVDTFRHFHP
TRAGAFTCWSTLTGARRTNYGTRIDYIFADYQLAKEQFVAADIMPEVEGSDHCPVWGGLR
CSLLSNSKPPPLATCYLPEFAGKQQKLSRFLVKMDQNPCRTDSKEALPGSQEEAERRENI
NVTGTKRILRTESACQTSKKVKTAKTSSKPQGSLLAFFKPQNGKALGSSHNSLKACPVEN
TPQLHSATQDKMTQGEQTDSPRDNKEASLGFWKSVLHGPPPAPTCKVHGEPCVLRTVRKE
GPNVGRQFFVCARPQGHVSNPEARCNFFAWVDRGK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagtcacttggaatattaatggtatacggacgtttggttgtggaatcaaaaag
gcgcttgatgcactggaggcggatatcatatgcgtgcaggagaccaaagtgacaagagac
ctgctcgatgcaaggactgccatcgttgatgggtataattcctatttcagcttcagtcga
ggacgcagtggctactcaggggtcgccacttattgtaaggacagtgccacaccatttgct
gctgaggagggcctcactggtcttttgaccaatcatgcaggagctgtcggttgttatggt
aaccagtccgagtttacagatgaagagctgcagcttttggacaacgaaggtcgagccgtt
atcacgcaacacagagtccaacattcggacaaaatccaaactgttactgtgataaatgtt
tactgtccacgagctgacccagaaaagccagagcgaaaagagttcaaactgcagttttac
aagctgcttcaggctcgagctgaggctatactgaagaacgggagctctgtaatcgtttta
ggagatgtaaatacctcacatcgaccaatagaccactgtgacccaaatgaaattgatgac
tttgaggacaatcctggcaggaaatggctgaacagctttttgagggacaacaaagcgtcg
ccgtcagcagatttctcccatgatggcaagtttgtcgacacgtttcgccatttccacccc
actcgcgctggcgccttcacgtgctggtccactctcacgggggctcgccgcaccaactac
ggcacgcgcatcgactacatctttgctgactatcagcttgccaaggagcagtttgtggca
gctgacatcatgccggaggtcgagggctcagatcattgtcccgtgtgggggggtctccgg
tgctctctgctgtccaactccaagccgccccctctcgctacctgctacctcccagagttc
gccggcaagcagcagaaactctcacgctttctggtaaagatggaccaaaatccatgtcgg
actgactcgaaggaggcgctgcccggatcacaggaagaagccgaaaggagggagaatata
aacgtcacgggcaccaagagaatcctgaggacagagtctgcctgtcagacgagtaaaaag
gtcaaaacagctaagacttcttcaaaaccacagggcagccttcttgccttttttaaaccc
caaaatggaaaagcacttggttcttcacacaattccctcaaagcgtgcccagttgagaac
acgccacagcttcacagcgccacgcaagacaagatgacacaaggtgaacagacagacagc
ccacgcgataacaaagaagcatctttggggttttggaagtccgtccttcacggcccgccc
ccggcgcccacctgcaaggttcacggtgaaccctgcgtgttgcgcactgtcaggaaggag
gggcccaacgtaggccgccagttctttgtatgcgcccgccctcaagggcatgtttccaac
ccagaagcacgctgcaatttctttgcatgggttgacaggggcaagtaa
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