Syngnathus scovelli (Gulf pipefish): 125988019
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Entry
125988019 CDS
T08785
Symbol
asxl1
Name
(RefSeq) polycomb group protein ASXL1
KO
K11471
additional sex combs-like protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125988019 (asxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125988019 (asxl1)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
125988019 (asxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
125988019
NCBI-ProteinID:
XP_049608695
LinkDB
All DBs
Position
2:complement(13726559..13736752)
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AA seq
1483 aa
AA seq
DB search
MKDKQKRKKERTWAEAARMVLENFSDAPMTPKQILHVIQTKGLKEMRSGTAPLACLVTML
HSQVRGDRVKNSIFFKLPGRMSLFTLKKNALQWTKTSESERQSELGSSAATPTSSTNTPT
EGAAVGPSETTEQESCNSTETTASNLALADETSSSVTGPTELQSTSQPQTRLSRAAGLQG
RTEQVQHVPHTQTRLSRSRQSGRQRKKAVMMPRVVLTPLKVNGEHVPSGPMKRTRGGVDV
DFETPGSILVNTNIRALINVRTFSAFPAQSQQQLLQLLPEVDRQVGPDGMARLSNSALNN
EFFTHASQSWKERLAEGEFTHEMQVRFRQEMEKEKKVEAWKEKFFEEYHGQKSGLTREES
LKLTMGDANEVATSVLDSDSVSVVSTGAPKRRSVGRRRRDGRMRRRTRADLRRRARRPLC
KTSSPVVQSAEAAEDVASLETSTVSIGSPMSESTVIQGEVVLQAECDEELPPDHVSIEPK
SPIPEPVLLPAPTPTPIPSPESTSDDKEPSISGCLLPEEVAPVLASTSSPSSSSSSSDSS
PSSSPSSASDQQGAFTTGLDSSSSSSVSSGAAITTDHLDDTASAVTSVTGGTATSSRESS
PSDSPAGTPAPSTQHKEQKRRPDETRAFSSFPEKRPRLNDQQSFRTTIDRVHSEKPQPTT
EEPKVPPIRIQLSRIKPPWIKGHPTYQICPRIVPPGEASRRSGTGGARTLADIKARAQQA
RAQREAAAAVAASADGPGPNRVRLRPAAGLPDSNSGQRAQEHPGPIEPGGGSGRGGGGTQ
EHGKTCETNPSGAQLQHPNVEGKAQPSPSPPATSTTVFSEHPQTTSPSQKAVGRLPVAEE
GFIPKSSGIQTPSDRPAVQATDETDTAANYVMSSRERQNKITVSATSPSERLEPVREIKP
LAPTSIPDSLPRFGAPGVVVQKLVKSAMPVVVEHEKDRGLGGVIQHVSLHEDSQDTDTDS
AITHQAEASSPRVDSSGRDDDAGMHSDSTETASDCENESHLDEQQPDQDWCSQMRGYRKV
VCSPSLNHQPVIQAHESACHGQTVIQPCFPNGVTHAPQSRTFSQDRRSHNNVVVKVEPVD
DCRNTRQCSTEEEYNGRSKPSTYPLSISGTSKKVSTSTRPVSSVEANNPLVTQLLQGSLP
LDKVLPPHCADRLEVSRPAGPQRRPYNRAEAAVQLPNSEGSVAPQVKSQKSYPVSCLMET
PTTPQYQPQQASGAIPVITSPPFTTSSSNHGVGMVVIKESTVHQPSQGAIPNRSQSAHRT
ILNGPSPTHADPCPTEVVPSLKINWRSPQSQIPLANHQEPAPAPNVKTEVGSKPSCQAIA
KASVVVTKKEPLSSMDGYPSGGAMEGLINMEMNLSRMAKNELSKAPYHSYHSSSSSLPFQ
LYGKISKQGGGLGGVSYTANVSVMDNSSFSRNMTDGVLQLRPRLATSQATLSIQTFTDST
AEEVSLKCSCRLKAMIMCQGCGAFCHDDCIGPSKLCVSCLVVR
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaacaaaagagaaagaaggagcggacctgggcggaggcggctcgcatggtg
ctggagaacttctcagatgctccaatgactccaaaacaaattcttcatgtcatccagacc
aaggggctgaaggaaatgcgaagtggtacagcacctttggcctgcctggtgacaatgctt
cactcccaggtgaggggagatcgggtcaaaaacagcatcttctttaagttgcccggacgg
atgagcctattcactctaaagaagaatgcacttcagtggacaaagacttcagagtcagaa
agacaatctgagctgggaagcagcgccgctaccccgacctccagcaccaacactcccaca
gagggtgcagccgttggcccctctgagacaactgagcaggagagctgcaactcaactgag
accactgcctccaatttggccttagcggatgaaacatcctccagtgttaccggacccaca
gagctgcaatctaccagccagccccagacccgtctcagcagagctgcagggttgcaagga
cggactgagcaggtccaacatgttccacacacccagaccagactgagccgatctcgacag
tcaggacggcagcggaagaaagcagtcatgatgccacgtgttgtcctcactccgcttaaa
gtcaatggagagcacgtgccgtcaggaccgatgaagaggacccggggaggggtggatgtg
gactttgaaacaccaggctctatccttgtcaacaccaacatcagggctctcattaatgtg
agaaccttctcggcattcccagcccagtcccagcagcagctcctgcagcttctgccagaa
gtagaccgccaagttggaccagatggaatggccagactcagtaattcagccctcaacaac
gagttctttacacatgcctcccaaagctggaaagagaggttagctgaaggagagttcact
catgagatgcaggtgcgattccggcaggaaatggaaaaggagaagaaggtggaggcgtgg
aaggaaaagttttttgaggaataccatggacagaagtctggcctgactagagaggaatcc
ctgaagctcacgatgggtgatgcgaacgaagtggcaacaagtgtcctggacagtgacagc
gtctctgtggtgtcaaccggtgcccctaagagacgcagtgtgggtcggcgaaggagagat
ggtcggatgaggagacgcactcgggccgatctgcgtcgccgggcccgtcggcccctctgc
aaaaccagctctccggtggtgcagtctgctgaagcggctgaagatgttgcttctctggaa
acctccactgtctccattggttctcccatgtcagaaagcacggttattcaaggtgaggtg
gtgctgcaggctgaatgcgacgaggagcttccaccagaccacgtctccattgagccaaag
agccccatacctgaaccagtcctactgccagcccccactccaactccaattcccagccca
gagtccaccagcgatgacaaagaaccaagcatttcaggctgtctgctgcccgaggaggtt
gcacctgtattagcttccacctcatccccgtcttcatcctcttcttcctctgattcgtca
ccttcgtcctcgccttcctcagcttctgatcaacagggagcatttaccactggcttggac
tcttcgtcatcctcctcagtgtcatctggtgccgcaatcactacggatcacctggatgac
actgcgtctgcggtcacctcagtcaccgggggaactgccaccagcagccgtgaaagcagc
ccctctgatagcccggcaggcacccctgcacccagcactcagcacaaggaacagaaacga
aggcccgatgagacgcgagcgttctccagcttccccgaaaagaggccacggttgaatgac
cagcagtcctttcgtaccacaattgacagggtccattcagagaaaccgcagccgacaacg
gaggaacccaaggtgcctccaatcaggattcaactgtccagaatcaaaccgccctggatt
aaagggcaccccacctaccagatctgcccccgcatcgtgccccctggagaggcctcgcgg
aggtcggggacggggggcgcgcggacgctcgcagacatcaaagcccgcgcccagcaagcc
cgcgcccagcgggaagccgctgctgctgttgcagcctctgccgacgggccagggccgaac
agggtccggctgcggcctgctgctgggttaccggatagcaacagtggacagcgagcacaa
gaacatccaggaccgattgagccaggaggaggaagtggaaggggaggtggcgggacacag
gaacacggaaagacttgtgaaacgaatccatctggagcacagctacagcatcccaatgta
gaaggcaaagcccagccttcgccatccccgcctgctacctcaaccactgtgttctcggag
cacccgcagacaacgagcccctctcaaaaagcggtgggaaggcttcctgtggccgaggaa
ggatttattccaaaatcatccggtattcaaaccccttccgacagacctgcggtccaagca
actgacgagactgacacggcggcaaattacgtaatgtcttctcgcgaaaggcaaaacaag
attacagtgtctgcgacttccccttcagagaggcttgaaccagtgagggaaattaagccg
ctcgcgccaacctccatccctgattcccttcccagatttggggctccgggtgtggttgtt
cagaagctggtcaaatccgcgatgcccgtggtggttgagcatgagaaagacagaggcctt
ggtggtgtaattcaacatgtttcccttcacgaggattcccaggacactgacactgactcg
gccataacacaccaagcagaagcgtcatctcctcgtgtggactcctctggcagggatgat
gacgctgggatgcatagtgattccacagaaaccgcttcagactgtgagaatgagagccac
ctggatgagcagcagcccgaccaagattggtgttcccagatgagaggctaccgaaaggtc
gtttgtagcccttctctgaaccaccagccggtcatccaagcgcacgagtccgcttgccac
ggtcaaacggtcattcagccgtgctttcccaacggtgtgactcatgctccacagagccgg
accttttctcaagatcgacggtctcacaacaacgttgttgttaaagtcgaacctgtggat
gattgccggaacaccagacagtgttctacggaagaagaatataatggacgtagtaagccc
tctacgtatcctttgagtatttctggaacctccaagaaagtgtccacttccactagacca
gtgtccagtgtggaagccaacaaccctctagtgacacagcttctacagggtagccttccc
cttgataaagtcttacccccacactgtgccgacaggctggaagtcagccgacccgcagga
ccccagcgaagaccctacaacagggccgaggcggcagtccaattacctaactcggaagga
agcgtagctcctcaagtcaagtcccagaaaagctaccctgtatcgtgtttaatggagacc
ccaactacaccacagtatcaacctcagcaggcatccggggccatcccggtcatcacctcg
ccgccgttcaccacgtccagctctaatcatggtgttgggatggtagttattaaagagtct
actgtccaccagccctcgcaaggagctataccaaacaggagtcagtctgctcacaggacc
atactgaatggcccatcgccaactcacgcagacccttgtcccacggaagttgtgcctagt
cttaaaatcaattggcgatcccctcagtcacagattccccttgccaaccaccaagagcca
gcccctgctcccaatgtaaagactgaagttggttcaaagccctcttgccaggcaattgct
aaagcatccgttgttgtcaccaagaaagagccgctgagttctatggatggatacccgagt
ggaggagcgatggagggactcattaatatggaaatgaatttgtctcggatggccaaaaat
gagctcagcaaagctccgtaccacagttatcactcgtcgtcctcctccctccccttccag
ctctacgggaaaatctccaagcagggcgggggtctcggtggcgtcagctacaccgccaac
gtatctgtgatggacaatagcagcttttcccgaaacatgactgacggcgtgctgcagctg
cggcctcgtttggccaccagccaagccacgctcagcatccagacctttactgacagtacg
gccgaggaggtgtcgcttaagtgctcctgtcgcctcaaagccatgatcatgtgccaaggc
tgcggggccttctgccacgatgattgcattgggccctccaagctctgtgtgtcttgtttg
gtggtgagataa
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