Syngnathus scovelli (Gulf pipefish): 125988037
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Entry
125988037 CDS
T08785
Name
(RefSeq) zinc finger protein 335
KO
K24371
zinc finger protein 335
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125988037
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125988037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_7th_ZNF462
zf-C2H2_6
zf-C2H2_ZN142
zf-C2H2_16
AT_hook
Actin_micro
NMB0315_dom_I
zf-C2H2_5
Motif
Other DBs
NCBI-GeneID:
125988037
NCBI-ProteinID:
XP_049608735
LinkDB
All DBs
Position
2:complement(9942412..9955067)
Genome browser
AA seq
1591 aa
AA seq
DB search
MDSEENEVESSSDAGPAGMEEPSESGMGMESSEAMSADSSDAASSHAQPPESDCHVGQSS
EGLVVFIPETSSSTDVRVSSVHLPDSSSVAQSTSVSSVSTVTQSVLVSESVQVLVHSSAA
PSEGAMMVSDSTASTSSDLGSAIDKIIESTIGPDILNGCIAVTSAEDRDAEPTQYLIVQG
APMVAHMSSSVLSGRIATEALSEGPTSTCLDQGDMQRSPEPDQPDDQPGHSGYPEDSSSH
PDQPQHSHPSQYLDCGADGPDQTGESSPSYAECSEEPDQTRSQSGFPDYSGDNSDQDLPG
YVECSRADSNPTSRGNYVVECSAHYLCTVDDGERPHHSRAYIDSSADHRTQMSRQYTAAA
DSEQPECSRYRARDDDDDERTQDPDQPQQQPQHSCYTENSNGPDASLYTEDSSSSDHRVA
DTADSGGVPEVAECSQSQLSLYISSSGTYTANYKPDVAPQCSASRDDPRQVEAAPGQREN
ATAVAEGSGDRPPNLAELEEMMEVVIVQQYKCKMCPYKSVSKDTLINHMREKHFKPSGGL
QTKRKRGRPPKSATAASQQADQGKKEEVATKRREMQVKVSASHQAQEDDDQEDQIPDAGA
IDDSEEDSNYNPAEEDCHGRLPAILKKHTPPISSSSQGRPQRKVGRPRKYNILEEDDDSQ
EAESLAKKPRVNSDASAADQASSSGLDNDGGALAADRDEEVEVVVSQSDSENKDPSSNSQ
QEEFFQRKRGRPSKCFLRKKYKKHLSRNRYYKSLKPLLRPHSCWICGSRFLTQEDLRFHV
DSHEGNEPERFKCLQCNYRCKRWSSLKEHMFNHEGTKPFKCEKCEYSSVYRKDVIRHAAV
HDKEKKKKTDVTVVTVTEFPCPMCHKVYPMQKRLTQHMKTHSAEKPHMCDKCGKSFKKRY
TFKMHLLTHLQSVGNSTFKCEFCDYTCANKKLLLNHQLSHTSDRPYKCEHCKYTTSKEDF
LVSHLAIKHTGDKPFACTMCHFGTKHRKNLRLHVQCRHPEAFEEWSIANPAAETKPRRKP
FYALQHVEEQKEQDEGGAQVVPNGIVSVDPAALEAIQGMGNASLSQDALGNTTIIYEHAE
SGELSAQNALSLLLNMSNARELVGDALQVTVLKADGSTDVKALEKETWSAISAASGQAHK
VVTVHVSENGDTVLQEAYEAETEEIAQIGMETYTDEGEFNVVEQVTEEVQSSECSNENTD
QVQESEEQNLKSDKFYLASGLPDGVLQVELSSEAPSSPSATSSPCVSGKRFSCRICTESF
HCRSDMENHKRAHVDTNTFRCHDCDFTSSSWPEVKAHMELHSYLRPHKCLNCSFASKNRK
DLRRHLLTHTNEKPFSCTLCGQSFNRNGHLKFHKERVHNQKQTTTRKSRGAASQQTIVVN
GDEEALATLQSLHAHQAVISTDQLQALSQEHIIVAQDQSLTDQEETTYIQQITTIDGQTV
QHLMTGDNQVTEVQYIISQDGVQHLIPQEYVVLTEGNHIQIPDGQIIQYEHEEGFLQEQQ
MAVSTDNPIQYLPAAASEQQALETAAHSAVTAVADAAVIAEAQVQEVYTTEATPEQMAQL
QQEQEEQQQQQPPQQQQQQGVHYDIIAFTVE
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atggattctgaggagaatgaggtggaaagcagtagtgatgcaggccccgctggcatggag
gagccgtcggaaagcgggatgggcatggagtcgtcggaggccatgtcggctgacagcagc
gacgctgcttcctctcacgctcaaccacccgagtcggactgtcatgtgggacagagctcc
gagggacttgtggtcttcatcccggagacaagctccagcacggacgtccgagtgtcctcc
gttcacctcccagattcttcttcagttgcccagtccaccagcgtttccagcgtgtccact
gtgactcagtcggtgctggtgtccgagtcggtccaagtgcttgttcattccagcgccgcc
ccgtctgaaggagccatgatggtgtccgactccactgcctctacctcatctgacctgggc
tcagccattgacaagatcattgagtccaccattggccctgacatcttgaatgggtgcata
gccgtaaccagtgcagaagacagagatgcagaaccaacgcaatatctcatagtacaaggt
gctccgatggtagcccacatgtcctcctcggtcttgtctggtcgaatagccaccgaagca
ctctccgagggtcccacgtccacctgtctggaccagggagacatgcagaggagccctgag
cccgaccagcccgacgaccagccgggacactctggctacccagaagacagcagcagtcat
cctgatcagccccaacactctcacccatcccagtacctggactgcggtgcagatggccca
gaccaaacaggggagtcctccccttcctacgcggaatgttctgaagaacccgaccaaacg
cgctcccagtcgggcttccccgactacagtggcgacaacagtgaccaagacctgcccgga
tatgttgaatgcagcagggcggattcaaaccccaccagccggggcaactacgtggtggag
tgcagtgcccactatttgtgcactgtggacgacggagagcggccgcatcactcgcgcgcc
tacatcgacagcagcgcggatcacaggacgcagatgagccggcagtacaccgctgctgcc
gattctgagcaacccgagtgttcccgttaccgggcacgtgatgacgacgacgacgagcgg
actcaagatcccgatcagccacagcagcaaccccagcattcctgttatacagagaacagc
aatggccccgatgcgtccctctatactgaggacagctcctcgtcagaccaccgtgtggca
gacacggcagattcagggggggtcccagaggtggcggagtgcagccagagccagctgagt
ctctacatcagcagcagcggcacctacacggccaactacaagccagatgttgcgccacag
tgctcagccagccgggacgaccctcggcaggtggaagccgccccgggccagcgagagaac
gcgacggctgtggctgaaggctccggagaccggccgcccaacctggctgagctggaggag
atgatggaagttgtgattgtacagcagtacaagtgcaaaatgtgtccgtacaagagcgtc
tccaaagacacgctgattaaccacatgcgggaaaaacacttcaaaccttcagggggtttg
caaacaaagcgcaaacgtggccggcctcccaaaagcgccacggcggcttctcagcaggca
gaccaagggaagaaggaggaggtggcaacgaagaggagagaaatgcaggtgaaggtatct
gcatctcatcaagctcaagaggatgacgaccaggaagaccagattccagacgctggtgct
attgatgattctgaagaggacagtaactacaacccagctgaagaggactgccacggaaga
ctacctgccattttgaagaaacacactcctccgatctcttcctcctctcaaggtcgtcct
cagcgtaaagttggccgtccaaggaaatacaacatcctggaagaagatgacgacagccaa
gaggcagagagtttagcgaaaaagccaagagtgaattccgacgccagcgcggctgaccag
gcgagctcctcgggcttggacaacgacggcggcgctctggcggccgacagggacgaagag
gtggaggtggtggtgagccagtcggactcggagaacaaagacccctcgtccaactctcag
caggaagagttctttcagaggaaacgaggacgcccctcaaagtgctttctccgcaagaaa
tacaagaagcatttgagtcgcaatcggtactacaaatccctcaagccgctcctgagacct
cacagctgctggatctgcggctcgcgcttcctcacgcaggaagatctgcgcttccacgtg
gactcccacgagggcaacgaaccagagcgctttaaatgcctccagtgcaactaccgctgc
aagcgctggtcctcgcttaaggaacacatgttcaaccacgagggtacgaagccgttcaag
tgtgagaagtgcgagtactccagtgtttaccggaaagatgtcattcgtcacgccgcggtc
cacgacaaagagaagaaaaaaaagacagatgtgacggtggtgacggtaacagagttcccg
tgtcctatgtgtcacaaagtttaccccatgcagaaaaggctgactcagcacatgaagacc
cacagcgcagagaagccgcacatgtgtgataagtgtggcaaatccttcaagaagcgttac
actttcaaaatgcacctcctaacgcaccttcagagcgtgggcaacagcacattcaagtgt
gaattctgtgactacacttgcgccaacaagaagctgctgctgaaccaccagctctcccac
accagtgatcgaccctacaagtgcgagcactgtaaatacactacctccaaagaggacttc
ctcgtgtcccacctggctattaaacatacaggagacaagccctttgcctgcactatgtgt
cactttgggaccaaacatcgcaaaaatctgcggctccacgtgcagtgtcgccatccggaa
gctttcgaggagtggtctatcgctaacccggcagctgagaccaagccacgtcgcaagcct
ttttatgccctgcagcacgtagaggagcaaaaagagcaagacgagggtggagctcaagtc
gtgccgaacggcattgtttcagtggaccctgcagctcttgaagctattcaggggatggga
aatgcgtcactatcccaagatgcactgggaaacaccaccatcatctatgaacatgctgaa
tctggtgagctctctgcccagaatgccctgagcctgctgctaaatatgagcaacgcccgg
gaactggtcggagacgccttacaagtgacggtgctcaaggccgatggcagcacagatgtc
aaagctctcgagaaagaaacgtggagcgctatttcggcggcatcgggtcaggcccacaag
gtcgtcacagtccacgtgtctgagaacggtgacaccgttttgcaggaggcctatgaggca
gagacagaagaaatcgctcagattggcatggaaacctacacggatgaaggggagttcaat
gtggtggagcaggtgaccgaagaagtccaaagctctgagtgcagtaatgagaacaccgat
caggttcaggaatctgaggaacagaacctgaagagtgacaagttctacctagcttctggt
ttgcctgacggtgttttgcaggtggagctcagcagtgaagcgccctcatctccttccgcg
acgagctcaccctgtgtcagcggcaagaggttctcctgtcgcatttgcacagagtctttc
cactgccgctcggacatggaaaaccacaagcgggcacacgtggataccaacaccttcagg
tgccacgactgtgacttcacctcaagctcctggcccgaggttaaggctcacatggagctg
cactcgtacttgcgacctcacaagtgcctcaactgcagctttgcctccaagaacaggaag
gacctgcgcagacacctgctgacacacaccaacgagaagccattttcttgcacactttgt
ggacagagcttcaatcgcaatggccacctcaagttccacaaggagcgtgtccacaaccag
aaacagaccaccacgcgcaaaagccggggtgccgcgtcccagcagaccatcgtagtcaat
ggcgacgaggaggcgctggccacgctgcagtccttgcatgcccaccaggcagtcatcagc
acagatcagctgcaggctctgagtcaagagcacatcatcgtggcccaagatcagtcccta
actgaccaggaggagaccacatacatccagcagatcacaaccattgacggacagacggtc
cagcacctcatgactggagacaatcaggtcaccgaggtgcagtacatcatctcccaggat
ggcgtgcagcatttaatcccgcaggagtacgtcgtgctaacagaaggcaatcacatccag
ataccagatggacagatcatccagtacgagcatgaagaaggctttctgcaggagcaacag
atggcggtcagcaccgacaatccaatccagtacctgcccgctgctgcctcagaacagcag
gctctagagaccgccgcccactctgctgtcacagcggtagccgacgcggcagtgatagcg
gaggcgcaggttcaggaggtttacacgacggaagctacgcctgagcagatggcgcaactt
cagcaggagcaggaggagcagcagcagcagcagccgccgcagcagcagcagcagcagggc
gtccactatgacattatcgctttcactgtagagtag
DBGET
integrated database retrieval system