Syngnathus scovelli (Gulf pipefish): 125988059
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Entry
125988059 CDS
T08785
Symbol
rad51c
Name
(RefSeq) DNA repair protein RAD51 homolog 3 isoform X1
KO
K10870
RAD51-like protein 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03440
Homologous recombination
sscv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125988059 (rad51c)
03460 Fanconi anemia pathway
125988059 (rad51c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125988059 (rad51c)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
125988059 (rad51c)
FA (Fanconi anemia) pathway
Other FA pathway factors
125988059 (rad51c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
RecA
ATPase
DnaB_C
AF1548-like_C
NACHT
AAA_24
AAA_18
AAA
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
125988059
NCBI-ProteinID:
XP_049608797
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All DBs
Position
2:10032289..10034081
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AA seq
356 aa
AA seq
DB search
MQRPVSTLRLSPQVKVKILNAGFQMLDDVMQVSALELSREAGLSQEEALEVLKAARREGG
ADGEGAAADGASLTALDLLQKEEEQNRIVTFSSRLDAALGGGLPVGKTTEICGAPGVGKT
QLCLQLAVDVQVPPCFGGLGGQVVFIDTEGSFMVQRAVDLAAATVRHCTLLAEGAEQRDA
ASTFTVETILSNIFLVRCHDYVELLAEIYLLPDFLSSHPKVRLLVIDSVAFPFRQHFDEL
QSQRTRLLNGLAQQLISMATKHDLAVVLSNQMTTRLQGGQSKLVPALGESWGHAPTVRLL
LRWAGSQRQATIFKSPEHEEATVNYQITMDGFRDDDRSEEPPSKRPRTLADQSAAC
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaccggtgtccactctgcgactgagtccacaggtcaaagtcaaaatcctcaac
gcagggtttcagatgctggatgacgtcatgcaagtcagcgcactcgagcttagtcgagag
gcaggtctgagccaagaggaggcgctggaggtgcttaaggctgcgaggcgggagggagga
gctgatggagaaggagcagcagcagatggagcttctttgaccgcactggatcttctgcag
aaggaagaagagcaaaaccgcatcgtgacgttctcctcacggctagatgctgcgctcgga
ggaggacttcctgtcgggaaaaccacagagatctgtggagcgccgggagtgggaaaaaca
caactttgtctgcagctggccgtggatgttcaggtgcccccttgttttggcggactgggg
ggtcaggtggtcttcattgacacagagggaagcttcatggttcaaagagcggtggacctt
gctgccgccacagtccgccattgcaccttgctggctgaaggagccgagcaacgagatgcc
gcctccaccttcaccgtggaaacgatcctgtccaacatcttcctggtgcgttgccatgac
tacgtggagctcctggccgagatctaccttctacccgacttcctgtctagtcacccgaag
gtccgcctcctagtgattgacagcgtggcctttccctttcgtcagcactttgacgagctg
cagagtcagcgaacccgcctgctcaatggcctggcccagcagctcatctccatggcaacc
aagcacgatttggcggtggtcctgagcaaccagatgaccacacggctgcagggcggacaa
tctaagctggtccctgctttgggggagagctggggtcacgcgcccaccgtgaggctcctc
cttcggtgggcaggttcacaaaggcaggcgaccatctttaagtcgccagaacatgaggaa
gccacggttaactaccaaatcacaatggatggctttagagatgacgaccgatcggaggag
ccgccaagtaaacgcccccgaacactggcagaccaatcggctgcctgctag
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