Syngnathus scovelli (Gulf pipefish): 125988117
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Entry
125988117 CDS
T08785
Symbol
vegfc
Name
(RefSeq) vascular endothelial growth factor C isoform X1
KO
K05449
vascular endothelial growth factor C/D
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04020
Calcium signaling pathway
sscv04510
Focal adhesion
sscv04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125988117 (vegfc)
04020 Calcium signaling pathway
125988117 (vegfc)
09133 Signaling molecules and interaction
04518 Integrin signaling
125988117 (vegfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125988117 (vegfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sscv04052
]
125988117 (vegfc)
Cytokines and neuropeptides [BR:
sscv04052
]
Cytokines
Growth factors (RTK binding)
125988117 (vegfc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
CXCXC
Motif
Other DBs
NCBI-GeneID:
125988117
NCBI-ProteinID:
XP_049608895
LinkDB
All DBs
Position
2:complement(9482805..9494451)
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AA seq
405 aa
AA seq
DB search
MLIPAVLLWILNVSKLCSGQDYMDYYSAGDTGTQAPVLSDDQVSLQSVKSVDQLLRLLYP
EYNLLQQCLRKKSWHASSSLFPSSSASPAVHLNHDDGWVQLREEPLYKVDSTLGVILEEI
QRTSCQPREVCIEVTKEYQQSTSQFYLPRCVALHRCGGCCTNEAFYCTNTSHALVNKTLM
ELSPPRMERSVVMVTFVNHTVCECLPKRPLHSIIRRAAMDHLCSPPSVPCAPAFLWDPVN
CMCVPIDAINYSEKETEALDSGLLALCGPNRVLKEPSCECVCRNGLTEASCGPGWKLDHN
TCECQCEGQDEGKWCPVGQRWNEELCGCVCAAQCPGNQPLNPDTCLCQCRESPQTCLRQG
KRFNPNTCSCYRLPCRTPKRACLSGFYYSHQVCQCIPNYMKPAWN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgttgataccagctgtcctcctatggattcttaatgtcagcaaactgtgctcaggacaa
gactacatggactactactcagcaggagacacgggaacccaggctccagtgttgtcagat
gaccaggtcagtttacagagcgtcaagagtgtggatcagctgctgcggcttctctatcct
gaatacaatctgcttcagcagtgcctgaggaagaaatcatggcacgcctcttcctcccta
tttcccagctcctcggcgagcccggcggttcatttgaaccatgacgatggctgggtgcag
ctgagggaagagccgctttacaaagtggacagtactctcggagtcatcctagaagagatc
cagcgcacttcgtgtcagccccgggaggtgtgcattgaggttaccaaagagtaccaacaa
tccaccagtcagttctacctcccccgctgcgtggcgctgcatcgctgcggtggatgctgc
accaacgaagccttttactgcaccaacacgagtcacgcgctcgtcaacaagacgctgatg
gaactatcgccacccaggatggagcgctccgttgtcatggtaacctttgtcaatcacacc
gtgtgcgagtgcctccctaagcggccacttcactccatcatcagacgagccgcaatggat
cacctatgttcccctccctcggtcccctgtgctccggcgttcttgtgggatcccgtcaac
tgcatgtgtgtgccaatagatgccattaactactctgagaaagagacagaggctttggac
tcagggctgcttgctctctgcggccccaacagggttctgaaggagcccagctgcgaatgc
gtctgtcgaaacgggctcaccgaggccagctgcggtccgggctggaaactggaccacaac
acatgtgaatgtcaatgcgaaggtcaggacgagggcaagtggtgccccgtcggccagcgc
tggaacgaggagctgtgcggctgcgtgtgtgccgcccagtgtcccgggaatcaacctctc
aaccccgacacctgcttgtgtcagtgcagagaaagtccacagacatgtctacggcaaggc
aagaggttcaaccctaacacctgcagttgctacaggttaccctgcaggacccccaaacgc
gcctgcctgtctggcttttactacagccaccaagtctgtcagtgcatccccaactatatg
aagcctgcgtggaattag
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