Syngnathus scovelli (Gulf pipefish): 125988252
Help
Entry
125988252 CDS
T08785
Symbol
zeb2b
Name
(RefSeq) zinc finger E-box-binding homeobox 2b isoform X1
KO
K23560
zinc finger homeobox protein 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125988252 (zeb2b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
125988252 (zeb2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_6
Homeodomain
zf-C2H2_15
zf-H2C2_5
zf-C2H2_2
Csm1_N
Motif
Other DBs
NCBI-GeneID:
125988252
NCBI-ProteinID:
XP_049609144
LinkDB
All DBs
Position
2:4230988..4280009
Genome browser
AA seq
1223 aa
AA seq
DB search
MRQEMMADGPRCKRRKQANPRRKNAALNYENVLETGSETEEDDKLQVSEEDPLINGTGSP
ASLVNADASPCAESHGLPTKEEEDDEMRDSGVEHIWPDSDMLSASADGADEIKDFDTLGP
DTTLQIAGNGTVKSVNCTSEFEDFFAKRKLGDSDSHVVSIAEYLQRGDTAIIYPEAPEEL
SRLGTPEAAGPEENDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEENFAC
PLCSYTFAYRTQLERHMATHKPARDQHQLLNQAAGNRKFKCTECGKAFKYKHHLKEHLRI
HSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLIAVNGRMRGGAMKTGSSPTSASSSPT
NTAITQLRQKLENGKPVSLVDHNNHLSIKTEPLDFNDYKLMMATHGFGAPGPFMNGVGGN
SPLGVHHNSTAQSPLQHLGMPGLESQLLGYPGPLMNNLSEVQKVLQIVDNTVCRQKMDCK
PEELSKLTAYMKELGSQVEEQKQGLNSAGGQVSLPLVNHNGATKSIIDYTLEKVNEAKAC
LQSLTADSKRQISNIKHEKANHMLEGGMEEKASENMFTPYACQYCKETFPGPIPLHQHER
YLCKMNEEIKAVLQPSENLMPNKHIFMEKNAHLTSSILTEKGMAGSLHPYRDHMSVLKAY
FAMNMEPNSEELLKISIAVGLPQEFVKQWFDQRKMFPYGSSRTPPPLEHKNNAEMLVGSN
NRHSPPKDPLAARSPMSLIKPGDRITSPAIAELHNNCDNSLRHLKNHQFGDAKPTGDKLD
HSRSNTPSPLNLSSTSSKHSHSSSYTPNSLVSEDLQAEPLDLSLPRLIKEPKHALTVKSR
PKVNSVSVELSGVPSPREHFEEPLNLAYLKKEFSASANNGNLEKSTSPIFGINPFAAKPM
YTSLPPQTAFPPATFMPPMQASIPGLRPYPGMEQMGFLPHMAYTYAAGAATFAEMQQRRK
YQRKHGFQGELLDATADYMSGLDDMTDPDSCLSRKKIKKTESGMYACDLCDKTFQKSSSL
LRHKYEHTGKRPHQCQICKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHM
NHRYSYCKREAEEREAAEREAREKGHLEPTELLMSRAYLQGMAPQGYPELAAVAAEREAI
LRHDGVNGGIVEGRKEVDQEYGKMGRREDEFEFEEEEESKSMDTDPDTLRDEEENGEHSM
DDSSLDGKMETKSDREDAMEDAM
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaggagatgatggcggatgggccccggtgcaagcggcgaaaacaggccaacccc
agacggaaaaacgcagctctcaactacgagaatgtgttggagaccggctcggagacggaa
gaggacgacaagttgcaggtgtccgaggaagacccgctgatcaacggcaccggtagcccg
gccagcctggtcaacgccgacgcctcgccgtgcgccgagagccacgggctgcccaccaaa
gaagaggaggacgacgaaatgagggacagcggagtggagcacatctggcccgacagcgac
atgctgagtgcctcggcggatggtgccgatgaaatcaaagatttcgacactttgggcccc
gataccactttgcaaatagctggaaacggtacagtcaagagcgtcaattgcacttcagag
ttcgaggacttttttgccaagaggaagctgggcgacagtgacagccacgtagtgagcatc
gccgagtatctccagcgaggcgatacagccatcatctacccagaagccccggaggagctt
tcccgacttgggacgccggaggcagcaggcccggaggaaaacgacctgccacctggaacg
ccagatgccttcgcccaactgttgacctgcccctactgcgaccgaggctacaagcgcttg
acatcactgaaggagcacatcaagtaccgccatgagaagaatgaggagaacttcgcctgc
ccgctgtgcagctacacgtttgcctaccgcactcagctcgagcgacatatggccacgcac
aagcctgcgagggatcagcaccaactgctgaaccaagcggccggcaaccgcaagttcaag
tgcaccgagtgcggtaaggccttcaagtacaagcaccatctgaaggaacatctccgcatc
cacagtggtgagaaaccctacgaatgccccaactgtaagaagcgcttctcgcactctggg
tcctacagttcgcatatcagcagcaagaagtgcatcggcctgatcgccgtcaacggtcgg
atgcgcggcggcgccatgaaaacgggctcctcgcccacctcggcgtcctcctcccccacc
aacactgccatcacccaactgcggcaaaagctggagaacggcaagccggtgagcttggtc
gaccacaacaaccacctgagcatcaagaccgaaccgctcgacttcaacgactataaactg
atgatggccacgcacggattcggcgcccccgggcctttcatgaacggagtcggaggcaac
agtccgctgggcgtccaccacaactcgacggcccagagccctctgcagcacctgggtatg
cccggactggagtcgcagcttctgggctacccgggccctctgatgaacaacctgagcgag
gtgcaaaaggtcctccagattgtagacaacacggtgtgcaggcagaaaatggactgcaaa
ccggaagagctgtccaagctcacggcctacatgaaggaactgggctcacaggtggaggag
caaaaacagggcctaaactcagcaggggggcaggtcagtcttccgctcgtcaatcacaac
ggcgccaccaaaagcatcatagactacacgcttgagaaggtcaacgaagccaaagcctgt
ctccagagcttgaccgcagactcaaagagacagattagcaatatcaaacacgagaaagcc
aaccacatgctggaaggtggcatggaggaaaaggcatcagagaacatgttcacgccgtac
gcgtgtcagtattgtaaagaaaccttcccgggtcccatccctctccaccaacacgagcgc
tacctgtgcaaaatgaacgaggagatcaaagccgtgctccaacccagcgagaacctgatg
cccaacaagcatatcttcatggagaagaacgctcatctgacatcttccattttgaccgaa
aagggaatggcgggttcccttcacccctacagggaccacatgtctgtgctcaaggcgtat
ttcgccatgaacatggagcccaactccgaagagctgctcaagatttccattgccgtcggc
cttcctcaggaattcgttaagcagtggtttgatcagcggaagatgtttccatacggtagc
agcagaacgccgccgccgctcgagcacaagaacaacgcggaaatgcttgtgggtagcaac
aaccgccacagtccccccaaagaccctctggcagcgcggtcgcccatgtctctaatcaaa
ccgggcgaccgtattacatctccagccatcgccgagctccacaacaactgtgacaactcc
ctcagacatttgaaaaaccaccaatttggcgacgccaaacccacgggtgacaagttagac
cattcccgcagcaacactccgtcacctctcaacctgtcgtccacctcctccaaacattcg
cacagcagttcgtacacccccaacagcctggtgtcggaggacctgcaagccgagccgctg
gacctttctctcccgcgactcatcaaggaacctaagcacgcgttgacggtgaagagccga
cccaaagtcaacagcgtctccgtcgagcttagcggcgtcccttcgccgcgcgagcacttt
gaggagcctctgaacctagcctatctcaagaaggaattctccgcctccgccaacaacggc
aacctggagaaaagcactagccccatctttggcattaacccctttgccgccaaacccatg
tacacgtcacttccacctcagacggcttttccgccggccacgttcatgccgcccatgcag
gccagcatcccgggactccggccctacccgggtatggagcagatgggtttcctaccgcac
atggcctacacatacgcagccggtgccgctacctttgctgagatgcaacagcggagaaag
taccagcggaaacatggtttccagggcgagctgcttgacgctaccgccgattacatgtca
gggctggacgacatgacagaccccgactcctgtctgtcgcggaagaagattaagaagact
gaaagtggtatgtacgcgtgtgacttgtgcgacaaaacattccagaagagcagttccctt
ctcagacacaaatatgaacacacaggcaagcgaccgcaccaatgccagatctgcaaaaag
gccttcaaacacaagcaccatctgatcgagcactcgcgcttgcactcgggcgagaagccc
taccagtgcgacaaatgcgggaaacgattttcgcactcgggctcgtactcgcagcacatg
aaccatcgttactcgtactgcaagcgcgaggcggaggaacgcgaggcggccgagagggag
gcccgcgagaagggccacctggagcccaccgagctgctgatgagccgggcctacttgcaa
ggaatggctcctcagggttaccccgagctggcggcggtggcggcggagcgcgaggccatc
ttacggcacgacggcgtgaacggagggatcgtagagggacgcaaggaagtggaccaagaa
tacggaaagatgggacgcagggaggacgagtttgagtttgaggaggaggaggaaagcaag
agcatggacacggacccggacacgttgagggacgaagaggagaacggagagcactcgatg
gacgacagttcgctggatggcaaaatggaaaccaaatcggatcgcgaggacgccatggag
gacgccatgtag
DBGET
integrated database retrieval system
