KEGG   Syngnathus scovelli (Gulf pipefish): 125988318
Entry
125988318         CDS       T08785                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125988318
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sscv03019]
    125988318
   03041 Spliceosome [BR:sscv03041]
    125988318
Messenger RNA biogenesis [BR:sscv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     125988318
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     125988318
Spliceosome [BR:sscv03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    125988318
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 OB_RNB RRM_3
Other DBs
NCBI-GeneID: 125988318
NCBI-ProteinID: XP_049609310
LinkDB
Position
2:complement(2725685..2729197)
AA seq 328 aa
MSKDIPREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDSNNRRSRGFGFVT
YSSVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEEQHL
RDYFEQFGKIEVVEIMNDRNTGRKRGFGFVTFDDHDAVDRIVIQKYHTINSHNCEVRKAL
PRQDMQSSGMRGGGFSGGRSGGGGGGGRPYDYDRGYNQGSRGRYSDNHYNGNDGGYGGGY
NNGGNRGYSQGYNQGGGGGGGGYGGNNYDSNGYGCGGGGSYNMGHYDSQSSNFGPMKNNF
GGGGGGGSRSYGGYGGNSNSGYSRQGRF
NT seq 987 nt   +upstreamnt  +downstreamnt
atgtctaaagatattccacgtgagccagagcagcttcgcaagctgttcatcggaggtttg
agcttcgaaaccacagacgaaagtttgcgggcccatttcgaacaatggggtagtcttact
gattgtgtggttatgagggattccaacaacaggagatccagggggtttggctttgtcacc
tactcatcagtacaagaggtggatgctgctatgtcagctcgtcctcataaggtggacgga
agagtggttgaacctaaacgtgccgtctccagagaggactccaaccgaccgggtgctcat
gtcacagtcaagaaaatattcgttgggggtatcaaggaggatactgaggaacaacacttg
cgtgactatttcgagcaatttggcaagattgaggtggttgaaattatgaacgatcggaat
accggaaggaagaggggctttggttttgtgacttttgatgaccacgatgctgtggacagg
attgtcattcagaaatatcacaccattaactcccacaactgcgaagtgagaaaggccctc
ccgcgacaggatatgcagtcctcgggaatgagaggaggaggattttcaggcggacgcagc
ggcggtggaggcggtggcgggcggccgtatgactacgacagaggctacaaccagggaagc
agaggtagatacagtgacaaccactacaacggcaatgatggaggctatggaggtggatat
aacaatggagggaaccgcggctatagccaaggatacaaccagggaggtggcggcggcggt
ggaggctacggcggaaataactatgacagcaacggttacggctgcggagggggtggcagc
tacaacatgggtcactatgattctcagtcctccaactttggccccatgaagaataacttt
ggcggcggcggtggaggcggcagcaggagctatggtggctatgggggaaactcaaacagt
ggctattcacgtcaagggcgattttga

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