Syngnathus scovelli (Gulf pipefish): 125988320
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Entry
125988320 CDS
T08785
Name
(RefSeq) dystroglycan 1
KO
K06265
dystroglycan 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03273
Virion - Lassa virus and SFTS virus
sscv04512
ECM-receptor interaction
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125988320
03268 Virion - Orthopoxvirus
125988320
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125988320
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125988320
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Motif
Pfam:
DAG1
a_DG1_N2
He_PIG
Motif
Other DBs
NCBI-GeneID:
125988320
NCBI-ProteinID:
XP_049609312
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Position
2:complement(7957819..7967794)
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AA seq
881 aa
AA seq
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MHYKMGDMGDGKARMCRTTSLVMGLLIATVLGAASEERDALVERFTIELEASMQSSVLPE
LQSAAAAMATPESSVNDGGVQMGIPDSSAVVGQVFQLRIPPIPENASCDLHLTEMGQTAL
PQWLYWDKESCILRGLALELDKGVYHIAVSGRDTNDKTSNREFPTTVFSIEVYPEERADT
EPSLLALQSDLSGLQPFTCGPEEPVTVLTVILDADLTKMVAEQRVTLLTVMRRFSHVPVE
HMRVVPVVNNRLFDMSAFMAGPGNAKKVVENGVLLSWKLGCALDQGNIPDISIVQSSAKD
GTMSGRLAYPVVGWHIANKKPHAVKRVKRQLYNTPTPVPSLLPPTTYPEPPVHIVPSPTS
PSIAPATDNSAPPVRGPLPLPVKPTMRVRDQIAHTPILGPPLPTRALGSTSTVLIQPTMT
RPTFVEATALPTLPSTTKKPKPSSTRKPKKPKTSTPAPREPKSTTAKPPKRTTSLPLAPD
LNSMPEIRNPIDQVNAWVGTYFELKIPPDTFFDKEDGTTDKLRLTLKHPPREAVGETSWI
QFNSTIQLLYGLPEEQHKGKHEYFMLATDKGGRSVMDAFEVQVNHWSTNHKPSVVFVARL
HGDPKTLSGDIHKKILLTKKLAYALGDRNSSTVTLQNITKGSIVVEWTNNSLPQGSCPKE
QIAALSNIIADPQGTPKPAFIKAMEPEFKPINISVRGANKCQSFTFIPPGEVPPIPDTPP
VTPSPGTGRRSSDDVYLHTVIPAVVVAALLLIAGIIAMVCYRKKRRGKMTMEEQATFIKK
GVPIIFADELDDSKSPPSSSIPLILQEEKPPLPPPEYPNMAGPHSTLLNQDLLEEYSAYQ
DDDPNAPPYQPPPPFTVPIEGKGSRPKNMTSYRSPPPYVPP
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgcactataaaatgggcgacatgggcgatgggaaagccaggatgtgcaggaccacctcg
ctggtaatggggcttctgatagccacggtcctgggtgctgcatcggaagagcgggatgca
ctggtggagaggttcaccattgaactggaggcttccatgcagtcttccgtgctccccgag
ctccagtctgctgctgccgccatggcaacgccagagtcctctgtgaacgacggaggtgtg
cagatgggcatcccagactcctcagccgttgtgggccaggtgttccagctgaggattcca
ccaatacctgaaaacgccagctgtgatctccaccttactgagatggggcagacagcttta
ccgcaatggctctattgggacaaagagagctgcattctgagaggcctggccctagagcta
gataaaggtgtgtaccacattgctgtgtctggacgagacacaaatgacaagaccagcaac
cgagagtttcccacaacggtcttttcgattgaagtttaccccgaggagcgagcagacacc
gaaccgtccctgctcgcgctgcagtctgatctgagtggcttgcagcctttcacttgtggc
cccgaggagcctgtcacggtcctcactgtcatacttgatgccgacttgacaaagatggtt
gcagagcagagggtcactttactgactgttatgagaagattctcacatgttcctgttgag
cacatgagggtcgtccctgttgtcaacaaccgcttatttgacatgtcagccttcatggcg
ggacctgggaatgctaagaaagtggtggagaatggagttctgctgtcatggaaactcggc
tgtgcccttgaccagggcaacattccagacatcagcattgtccagtcgtccgcaaaggac
ggaaccatgtcgggcaggctggcgtacccggtggttggttggcacatcgccaacaaaaag
cctcacgcggtgaaacgcgtcaaacgacagttgtataacacccccactccggtgccctcc
ttgctccctcccaccacttacccagaacccccggttcatatcgtccccagccccacttca
ccctcgatcgcccccgcaacagacaactctgcgccacctgtccgcggtcctttacccctt
cccgtcaagcccaccatgagagtccgagatcagatagctcacacgcccattttgggtccg
cctctacccaccagggctttgggatcgacaagcaccgtcctcatccaacctaccatgacc
agacctacatttgtggaagccaccgctttaccaacgctaccaagcaccaccaaaaagccc
aaaccttcgagcacaaggaagcccaagaagcccaaaacgtcaaccccggctccccgggaa
cccaaatccaccacagcgaaaccaccaaagcgtaccacctcgctccccttggcgccagac
ctcaatagcatgccagagatccgcaaccccattgaccaggtcaacgcgtgggtgggcacg
tactttgagcttaagattcctcctgatacgttcttcgacaaagaagacggcacaaccgac
aagctgcgtttgactttgaagcatccccccagagaggcggtcggtgaaacttcctggatt
caattcaacagcaccatccagcttttgtacggacttcccgaggagcagcacaagggcaaa
cacgagtatttcatgttggctactgataaagggggaaggagtgttatggatgcctttgag
gttcaggtcaaccactggtcaacgaaccataaaccctcagtggttttcgtcgcccgtctt
cacggcgaccccaaaactctaagcggcgatatccataaaaagattcttctgacaaaaaag
ttagcatatgctcttggtgatcgcaatagcagcacagtgaccctacaaaacatcaccaaa
ggctccattgtggttgaatggaccaacaacagcctcccgcagggttcttgtccaaaggag
cagatcgcagctctcagcaacatcattgcagatccgcaagggacacccaaaccagccttt
atcaaggctatggagcctgaatttaagcccattaacatctctgttcgcggtgccaacaaa
tgtcaaagcttcactttcatcccaccgggagaggtaccgccaatccccgatacccctccc
gtgacaccttcacctgggacggggcgtagaagcagcgacgacgtctacctgcacacggtc
atccccgcggtcgtggtggcggccctgcttttaatcgccggaatcatcgccatggtgtgc
taccggaagaagcgcagagggaagatgaccatggaggaacaggccaccttcatcaaaaaa
ggagtccctatcatatttgccgacgagctggatgattccaagtccccgccgtcctccagc
atccctctcatccttcaggaggaaaagccgccgctgcctcccccggagtaccccaacatg
gcaggtccccacagcacactgctaaaccaggatttgttggaagagtattcggcgtaccaa
gatgacgatcccaacgcgcctccttaccagccgccgccacctttcaccgtccccatcgaa
ggcaaaggatcccgccctaagaacatgacctcctacaggtcaccgcccccttacgtgcct
ccctaa
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