Syngnathus scovelli (Gulf pipefish): 125988327
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Entry
125988327 CDS
T08785
Symbol
sema3h
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H isoform X1
KO
K06840
semaphorin 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_2
V-set
Ig_3
PSI
ig
Ig_6
SH3_6
I-set
Motif
Other DBs
NCBI-GeneID:
125988327
NCBI-ProteinID:
XP_049609317
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Position
2:18546510..18587290
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AA seq
762 aa
AA seq
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MCGVATVVLLVHLGTTLTGAWKASQPRLQFTQSELIQNGRLLTLPLDAGDLHSLLPDEDG
MHLYVAMKDNLLSTSMDDITQNPRKLHWPASPDRVQECLMAGKDPEMECANFLRVLQPYN
KTHLYVCGTGAFNPRCAFIATSIFQQPGHQTLSYSQTECGKGKCPYDPFQKTASAVVDGE
LYAGITSDFMSRDSAFFRSLGNRHVIRTEQYDSTWLQDAHFVRVAPLSETDNPEDDKVYV
FFTERAQEAEGATGKVLHSRVARVCKNDIGGQRSLVNKWSTFQKARLVCSVPGPDGLQTH
FDQLQDVFILHGKDKKNPLIYGLFTTSSDILNGSAICVYRMEDVVRAFKGNFLHKEGPQY
KWAEFTGKVPYPRPGTCPSSTYGSYSSTREYPDDVIFFSRTHPLLEENVLPLGERPLLVR
VGVHYKFSKLLVDRVEAVDSTYDVLFIGTDSGLVLKAIHLPREHGPSQEVTLEELEVFQY
KSPVTVMTLSKKKQWLFVGSREGVSQLGLYQCELYGEACAECCLARDPYCTWDGHACSPY
MPTVRRRNARHLGEDEDPLTQCVRQGAGLQVEAEQRLMMVAEGNSTYLECLPRSRHAAVI
WYKQAGENSPELNQVMSGEQVVVIERGVLIRRAELSHSGVYHCQVEEHGYHWTAVTVHLA
VWSPSAERLTTSWSASSQQPWYGDAMTLVHPRNLDQHCRALGYRPPRNRHRDTVVQGAKE
KARAERHKHGGGRGGGGGGGGGGRSAGRKSRSKPQQRTPRSA
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggagtggcaacagtggtgcttctagtccacctcggaaccaccttaacgggggcc
tggaaagcatctcagccacgactgcagttcacacaatccgaactgatccaaaatgggcgc
ttgctgacgctgcccttggatgcgggagatctgcactctctgctgcctgatgaagatggg
atgcatctttatgtggctatgaaagataacctgttgtcgaccagcatggatgacattaca
cagaacccccgcaagttgcattggcctgccagcccggatcgagtccaagaatgtctaatg
gctggaaaggatccagagatggagtgtgctaacttcctacgagtcctgcagccctacaac
aagactcacctgtatgtgtgtggcacaggggccttcaacccaaggtgtgcttttatagct
accagcatcttccaacagccaggacaccagaccctctcctacagccaaaccgaatgtggg
aagggcaaatgtccgtacgatccgtttcagaaaacagcatcagcagttgtcgatggcgag
ctgtatgctggcattacttcagacttcatgagcagagactctgccttcttccgtagtctt
ggcaaccggcatgtcatccgcaccgagcagtacgactccacctggctgcaggatgcccat
tttgtgcgggtcgcgccactgtctgaaactgataatccagaagacgataaggtctacgtg
ttcttcaccgagcgcgctcaggaggccgaaggggccactgggaaggtgctccactccaga
gtggcccgggtgtgcaagaatgacattggaggccagaggagtttggtgaacaagtggagc
accttccaaaaggctcgtttggtgtgctcagtcccaggaccagatggcctgcagacacac
tttgaccaattgcaggacgtcttcatcctccatggcaaagacaagaaaaacccactcatc
tatggcctgtttaccacttcaagcgacatcctcaatgggtcagccatatgtgtttaccga
atggaggatgtggttcgggcttttaaaggaaactttctgcacaaagaggggccgcagtac
aagtgggcagagtttactggcaaggtgccctacccacgtcccggaacttgtcccagcagc
acatatggaagctacagttctacaagggaatatcccgatgatgtcatcttcttcagcagg
actcacccgctgctggaggaaaacgtgttgcccttgggagagcgccctctccttgtcaga
gttggtgttcactacaagtttagcaaactgctggtggacagagtagaagccgtggacagc
acctacgatgtcctcttcattggcacagactctggcctggttctgaaggccatccatctg
cccagagaacatggaccaagtcaggaggtaaccctggaggagctggaggtcttccagtat
aagtcaccagtgacggtgatgacgctctctaagaagaagcagtggttgtttgtgggctcc
agggaaggggtctcccagctgggcttgtaccagtgtgagctgtacggtgaagcctgcgca
gagtgttgcctggccagagatccatattgcacgtgggatggacatgcctgcagcccctac
atgcccactgtgcgcaggaggaacgctcgacacctgggcgaggatgaagatccattaact
caatgtgtcagacaaggagccgggctgcaggtggaggccgagcagaggttgatgatggtt
gccgagggcaacagcacctacttagagtgtcttccccgatccaggcacgctgccgtcata
tggtacaagcaagccggagagaacagccccgaactaaaccaggtgatgtcaggcgagcag
gtggtggtaatcgagcgaggcgtcctcatccgtcgggccgagctgtctcacagcggtgtc
taccattgccaagtggaagagcatggctaccactggaccgccgtcaccgtccacctggca
gtctggagcccctcggctgagcgactcacgacgtcctggtccgcctcctcgcagcaacct
tggtacggcgacgccatgacgctggttcacccgaggaacctggaccagcactgccgcgct
ctggggtaccgtccccctcgcaaccgccaccgtgacacggtagtgcaaggcgctaaggag
aaggcgagggccgagaggcacaagcacggtggaggacggggaggaggaggtggaggagga
ggaggagggaggtcagcgggtaggaagagcaggagcaaaccacagcaaagaacgccgagg
agcgcttga
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