Syngnathus scovelli (Gulf pipefish): 125988347
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Entry
125988347 CDS
T08785
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125988347 (gtf3c3)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
125988347 (gtf3c3)
TFIIIC, fungi type
125988347 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_14
TPR_6
TPR_12
TPR_9
ANAPC3
TPR_11
ARM_TT21_5th
TPR_20
SHNi-TPR
ChAPs
TPR_EMC2
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
125988347
NCBI-ProteinID:
XP_049609404
LinkDB
All DBs
Position
2:complement(10741019..10747834)
Genome browser
AA seq
945 aa
AA seq
DB search
MSGFSAELIDYLEGRITFEEFDRRRDERKAKELLVSVKNEEVVQPCTSTHNHGTIGSEEE
GISPGVQQAFASMIGEATDQVLSDEDNDSLGYVDDKNDEDFAVEEEDYVEDDDEEEEEEE
EVVGEKGHFKLKVKDKSAEGRGKRSFETEDKECEDMSVGDVLALEMELTRENKKMMKERR
NRSKLPRALRGLMGEANIRYARGEKDDAIAMCMEIIRQAPLAYDPFSTLAMIYEDEGDLD
KALQFSLIAAHLNPTDCEEWIRLAEVSLEQENVRQALVCYNKAVKYAPTNIRYLWERCSL
LMRLGEHKQCMDGYRRILSLLPMDEGEHFMQLSKDMAKSYYESSDLPSALGVIEQALARH
PDLVSDDIINMAAELYITNHQYEKALEVLVQFVGVVLIRDESHPETPIKVENLIENEVKN
DEAQPLIVAEVAPTDKSDIKDVQVPDGIPVDLKAKLIVCLIHLQVCAPLEALVSSLMEQS
PEDIGDLYLDVGEAYLEKAAYMSALPLLSALVISEKYNLAVVWLRHAECLKALGEMKAAA
ESFTKVVELAPQHLEARLSLATLQQQLGRPDCALKALESMYDNDTLARDSSAAQKELKLL
LHRSALLKTQGLIQHYLDAVITMISILLKVAMQRAQVCVRSVILSGENHLRLVKVGDMPS
DIDDPEAAYLEITCKTKVLSKEDWWQLLLSCVLTMCDVQRYEEAELMVESAMEFYSFYDI
KPRRKELEYLGLSANILDRNHHKAYNYIRLMLLEDVDQPQLWNIFNQLTISSHHQRHHRF
CLRQLLKHPDNRALCILCGHNAMVSGSFKHALGQYIQAFQAQPDEPLHNLFVGLTFFHMA
SQKYVAKRHLLVVQGFTFLRQYVELRGECQESMYNLGRALHQMGLTHLAIHFYQKTLLLP
IQTLEGIADDQVDLRREAAFNLSLIYQASGNIEMAHNLISTYCII
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtttcagcgccgaacttattgactacctggaaggaaggattacatttgaggag
tttgacaggaggagagacgagagaaaagccaaggagttgctcgtgtcagttaaaaatgag
gaggtggtgcagccttgcacgtccacgcacaatcatggaacaattgggtcagaagaagaa
ggaatcagccctggcgttcagcaagcctttgcctcaatgattggcgaagccaccgaccaa
gtattgtcagatgaggataatgacagcttgggctatgttgatgacaagaatgatgaggat
ttcgcagtggaagaggaggactatgtggaggacgatgatgaggaggaggaggaggaagaa
gaagtggtgggggagaagggacattttaaattgaaagttaaggacaagagtgcagagggg
agggggaagaggagttttgaaaccgaagacaaggaatgtgaggacatgtcagtgggagat
gtgcttgcactggagatggagctaacccgtgaaaacaagaaaatgatgaaggaacgacgc
aaccgcagtaaacttccccgagcgctcagaggcctgatgggtgaggcgaacattcgttac
gccagaggagagaaagacgatgccattgccatgtgcatggagatcatacgacaagcccca
ctggcctacgaccctttctccacgcttgccatgatctatgaggacgaaggcgacttggac
aaagcgctgcagttcagtctgatcgctgcccacttgaaccccaccgactgtgaggagtgg
attaggctggcggaggtctctctggagcaggagaacgtccggcaggctctagtctgctac
aacaaagccgtcaagtacgctcccaccaatatccgctacctgtgggaacgctgcagcctc
ctcatgcgtctgggggagcacaagcagtgcatggatggctaccgccgaatcttgtccctg
ctgccaatggacgagggtgaacacttcatgcagctctccaaggacatggccaagagttac
tatgaaagtagcgacctgccctcggcactcggtgtaatcgagcaggccctggcacgacac
cccgacctggttagcgatgacatcatcaacatggcagccgagctctacatcaccaaccat
caatacgaaaaggctttggaggtcttggtccagtttgtgggtgtggttttgatccgggat
gaaagtcacccagagacgccaattaaagttgagaatttaattgagaacgaggtaaagaac
gatgaggcgcagccattgattgtagcagaagtggcgccaacggacaaatctgacatcaag
gatgttcaggttccagacggcatcccggtggacctgaaggccaagctgattgtctgcctc
atccatttgcaagtctgtgcacccttggaggccctagtctcctcactgatggagcaaagt
ccagaggacattggcgacttatacctggacgtgggggaggcctacctagagaaggcagcg
tacatgtctgctctacctttgctgtctgcgcttgtcatatccgagaaatacaacctggct
gtcgtctggcttcgccacgcagagtgtctgaaagcgctgggtgaaatgaaagcagcggct
gaaagcttcacgaaagtggtggagttggcgccgcagcacctcgaggcgcggctgtcgctc
gccaccctgcagcagcagctcggccggccagattgtgccctcaaggcgctggagtccatg
tacgacaacgacacacttgcacgagactcctctgcagcgcagaaggaactgaagctcctc
ctgcaccggtccgcgctactgaaaacgcagggactcatccagcactacttggatgctgtg
atcaccatgatatcgatcctgcttaaggtggccatgcagcgcgcccaggtgtgtgtgcgc
tctgtcatcttatcaggagagaatcacctgcgcttggtgaaggttggggacatgccgtcg
gacatcgatgacccggaagcggcctacttggaaatcacgtgtaaaaccaaagtcctgtcc
aaagaggactggtggcagctgctgctgagctgcgtgctgacaatgtgcgatgtgcaacgt
tacgaagaggcggagttaatggtcgagtccgctatggagttctactccttctatgacatc
aagcccaggagaaaggagttggagtacctcggcctctcagccaacatcctggaccgcaac
caccacaaggcctacaactacatcaggttgatgctgttagaagatgtggatcagcctcag
ctttggaatatatttaatcaactgacaatatcctcccaccaccaacgtcatcatcgcttt
tgtctgcgtcagcttttgaaacatcccgataaccgcgccctgtgcatcctctgcggacac
aacgccatggtgtcaggcagctttaaacacgccttgggccagtacatccaggccttccag
gctcagccagatgagccgctccacaacttgtttgtgggcctcacctttttccacatggca
tcccagaaatatgtggcaaagagacacctactggttgttcagggtttcaccttcttgcgc
cagtacgtggaactgcgtggggagtgtcaagagagcatgtataacttgggcagagcattg
caccagatgggcctgacacatttagcaattcatttttatcagaagactcttctactgcct
atacagacactagagggtatcgctgatgaccaagtagatctgaggagggaggccgccttc
aatctgtccctcatttaccaggcaagtggcaacattgagatggcccacaatctcatcagc
acctattgcatcatctga
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