Syngnathus scovelli (Gulf pipefish): 125988382
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Entry
125988382 CDS
T08785
Symbol
arhgef16
Name
(RefSeq) rho guanine nucleotide exchange factor 16
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125988382 (arhgef16)
Membrane trafficking [BR:
sscv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125988382 (arhgef16)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SH3_2
SOS1_NGEF_PH
RHG20_PH
PH
Motif
Other DBs
NCBI-GeneID:
125988382
NCBI-ProteinID:
XP_049609467
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All DBs
Position
2:21535600..21545222
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AA seq
701 aa
AA seq
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MSHTQSDGCAGDRVPLILESHFSTELHISEPGDECYQSQSSPTVRPEAPITHEEDLNRLV
VPQQLILSTQSAAALKLGTQQIIPKNLAVASRPKNRHHTTVVTFPVGLENSNHGSRIRHS
TQGPNVGWEDYDSDGDGFALRRNRRNKSYRAAVTSLDIEAMARAKGAGNTLKPVKEGRAP
SPGAGRSPGRKRTLGRKRNRNQRGSFKDATPCLYQEIRERGLHSTNQDELLDDFVVVEAP
VEDQSIVVKSYRPAQLTWSQLPQVKETGILNMISPQERKRQEAIFEIITSEHSYLHSLGI
LVRHFKESDALRKTMTATEHHHLFSNISVIHQVSKRFFEDLERRHSDTPVIRDISDIVQN
HAAHHFDPYIVYCSNETFQQRTLQKLLSSNGAFKDLLKQIEESSECGGLPMISFLILPMQ
RVTRLPLLMDTICQKTPDKSAEYFAAVWALHAISKLVNSCNDGARRMERTEQMYTIQKQM
EFGKIKPFPLVSSSRWLKKRGELAVCAEELSIWRAFSNRSNYLFLFNDVLIVTKKKSEES
FLVMDYATLDNLEVEVSEESDGQASPPSKNSQYLSFNLLMSKNSEGRPERTTLVAESRVD
RARWIVALTEHKQTEHFSCKDGLPQCEATKAYMPKEPDELGLKQAELVIVQRKEEGWYYG
ERMRDGERGWFPASCATEITDPTAMENNMQRMKRLRKETNV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacacccagtcagatggctgtgcgggtgaccgggtccctctaattctggaaagc
cacttttccacagaactccatatatctgaacccggtgatgaatgctaccagtcacaaagc
tcccccactgtccggcccgaggcacccataacccatgaggaagacctcaacaggctggtg
gtgccccagcaactgattttgagcacccaaagtgcagcagcgctgaagcttggcacccag
cagatcattcccaagaatctagccgtggccagccggcccaaaaaccgtcaccacactacc
gtggtgacgttccctgtgggactagagaattccaatcacggatcccgtatccgacactcg
actcaggggcccaatgtgggctgggaagactacgatagcgatggcgacggcttcgctttg
aggaggaaccgcagaaacaagtcctacagagcggcagtgaccagtttggacattgaggcc
atggcaagggcaaaaggagctggaaacacactaaaacctgtgaaagaaggcagagcaccc
agtccgggtgcaggtcgcagccccgggaggaagagaacactagggaggaagaggaaccgt
aaccagcgcggatcatttaaagacgcaacgccgtgcctctaccaggagatccgagagcgg
ggcttgcactccaccaaccaggatgagctgctggacgactttgtggtggtagaagctccg
gtggaggatcagagcatcgtggtgaagagctacaggcctgcgcagctcacttggagccaa
ctgccacaggtgaaggaaactggcatactgaacatgatctcacctcaagagagaaaaaga
caggaggcaatctttgaaataatcacgtcggaacactcgtacctgcacagcctgggcatc
ctggtgcgacattttaaggagagtgacgctctgaggaagaccatgacagccacagagcac
catcacctcttttccaacatctcggttatccaccaagtcagcaaacgcttttttgaggat
cttgagcgacgtcactctgacaccccagtgatccgggacattagcgacattgttcagaac
catgccgcccatcattttgatccgtacattgtctactgttccaacgagaccttccagcag
agaacgctgcagaagctcctgagtagcaatggtgcctttaaggacctactgaagcaaatt
gaagagagcagcgagtgcgggggcctcccgatgatctcgtttctcatcctccccatgcaa
cgggttaccagactgccacttctgatggatacaatttgccagaagacccctgacaagtct
gccgagtactttgctgcagtctgggcactgcacgccatcagcaagctggtcaacagctgc
aatgacggtgcgcggcgaatggagaggacggaacagatgtacaccattcagaaacagatg
gaattcggtaaaatcaagccatttccactggtgtcgtcatcacgctggctgaagaaacgt
ggcgagctggctgtctgtgctgaagagctcagcatctggagagcgttcagcaacaggagc
aactacttgtttctcttcaatgacgtactcattgtcaccaagaagaagagcgaggagagc
tttctggtgatggactacgccactctggataatttagaggtagaggtcagcgaggaatca
gacggtcaggcgtcgccaccctccaagaacagccagtatctgtccttcaacctgcttatg
agcaagaacagtgaggggcgaccagagcgcaccacactcgtggccgagtccagagttgac
cgggcccgttggatagtcgctctaaccgaacacaagcagacagagcatttctcctgcaaa
gatggtctgccccagtgcgaggccaccaaagcctacatgcccaaggagcctgacgagctg
ggcctgaagcaagccgagcttgtcatagttcagaggaaggaggagggctggtactacggg
gagcggatgcgtgacggcgagagaggctggtttccagccagctgcgccacggagatcact
gatcccacggccatggagaacaacatgcagcgaatgaagcgcctccgcaaagagaccaat
gtttga
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