Syngnathus scovelli (Gulf pipefish): 125988478
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Entry
125988478 CDS
T08785
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125988478 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125988478 (nhej1)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
125988478 (nhej1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
125988478
NCBI-ProteinID:
XP_049609715
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All DBs
Position
2:2241594..2247776
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AA seq
328 aa
AA seq
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METIEASSDVLLQHPWLPISIDGCNLLVKSCFAETTYHILLTDMRCVWQETMQSAAIQSR
AQELNKRLQAPVKAFFSHLCEVVRPCLSGSGQPSENQVGITVMRPEGGDLCLRLKSKLAE
LPFYWEFRCTPAPVDVVCLHLVQPLVSMSHVLQQQVEELEELLVTKDAEIQDYKENGATL
SRARLQTDIFERHTYKVGFLAKTLAVVSSDDHGAKNFGDDLRELYTAIVAHGSKRKLSEQ
DQLVAVDPDPVTSSGPKNICVFGPRHDAGVEACAEGGEADDKQNPSSPEAEARDHIVHTV
PAQQLITCGRAEQTSSKAKKKKVVGLFR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccatcgaagcctccagtgatgttctccttcagcatccgtggcttcccatctcc
attgatggttgcaacctgctcgtcaagagctgctttgcagagacgacgtaccacatcctg
ctaactgacatgcgctgcgtttggcaggagaccatgcagtcggcagccatccagagccgt
gctcaggagctgaacaagcgtttgcaagcccccgtcaaagcctttttctcgcacctgtgc
gaggtggtgcggccctgtctgtccggcagcggtcagccgagcgagaaccaagttggcatc
accgtgatgcggcctgaaggaggcgacttgtgcttaaggctgaagagcaagttagcggag
ctgccgttctactgggagtttcgctgcacccccgctccagttgatgtggtatgtcttcat
ctggtgcagcccctggtgtccatgagccacgtgctgcagcagcaggtggaagagctggaa
gagttgctggtcacgaaggatgccgagatccaagactacaaggagaatggagccacactc
agcagagcgcgtctgcagacagacattttcgagcggcacacctacaaagtcggtttcctg
gcaaagactcttgctgtggtttcttccgacgatcacggcgcgaagaacttcggagatgac
ctccgagagctttacaccgccatcgtcgcacacggaagcaaacgcaaactgtcggagcag
gaccagttggttgcagtagatccggatcccgtaacttcctcaggcccgaagaacatttgc
gtgtttgggcctcggcatgatgcaggcgttgaagcgtgcgctgaaggaggagaagctgac
gacaagcagaacccgagcagcccagaggcggaagcgagagaccacatcgtccacacagtc
ccggcacagcagctcatcacctgcggccgtgctgagcaaacgtcttccaaagcaaagaag
aagaaagtggtgggcttgttccgatga
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integrated database retrieval system
