Syngnathus scovelli (Gulf pipefish): 125988489
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Entry
125988489 CDS
T08785
Symbol
hnf4a
Name
(RefSeq) hepatocyte nuclear factor 4-alpha isoform X1
KO
K07292
hepatocyte nuclear factor 4-alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125988489 (hnf4a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sscv03310
]
125988489 (hnf4a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
125988489 (hnf4a)
Nuclear receptors [BR:
sscv03310
]
2. Hepatocyte nuclear factor 4 like
2A. Hepatocyte nuclear factor 4 receptor
125988489 (hnf4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
125988489
NCBI-ProteinID:
XP_049609735
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Position
2:8724052..8742188
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AA seq
454 aa
AA seq
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MDMADYSEALDPAYTTLEFENMHVLAMGADSSPAESTNMSTTGHLTAGSMCAICGDRATG
KHYGASSCDGCKGFFRRSVRKNHMYSCRFNRQCIVDKDKRNQCRYCRLKKCFRAGMKKEA
VQNERDRISTRRSSYEDSSLPSINALIQADVLSRQISSPAPILNGDIRTKKIATITDVCE
SMKQQLLVLVEWAKYIPAFCDLPLDDQVALLRAHAGEHLLLGAAKRSMLYKDIILLGNDH
IIPRNCPELEVGRVAVRILDELVLPFQELQIDDNEYACLKAIVFFDPDAKGLSDPGKIKR
MRYQVQVSLEDYINDRQYDCRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMAKIDNLL
QEMLLGGSANEAPHAPHSLHPHLVQEHLSSNVIVAGNMPTPIHNGQISTPETPIPSPPTA
SSSEHYKIAQGVIATVPKQPTSIPQPTITKQEAI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggacatggcagactacagcgaggccctggacccagcttacaccacgctggagtttgaa
aacatgcatgtgctggccatgggcgcagattcctcgccagctgagagcaccaacatgagc
accactggccacctgacggcggggagcatgtgcgccatctgcggggacagagccacgggc
aagcactacggcgcatccagctgtgacggctgcaagggcttctttcggcgcagcgttcgc
aaaaaccacatgtactcgtgcaggttcaacagacaatgtattgtggacaaagacaagaga
aatcagtgcagatattgcagactgaagaaatgcttcagggctggcatgaagaaagaagcc
gtgcagaacgaaagagaccgaatcagcaccagaagatccagctacgaagacagcagttta
ccatccatcaatgcactcatccaagcagacgtgctgtcaagacagattagctcccccgcg
cccatcctgaacggcgacatccgcaccaaaaagatcgccaccatcacggacgtgtgcgag
tccatgaaacagcagctgctcgttctggtggagtgggccaagtacatcccggccttctgt
gacctgcccctggatgaccaggtggcgttgcttcgagctcatgctggagaacatctgttg
ctcggtgctgcaaagaggtccatgctctacaaagatattatcttattaggaaatgatcac
atcattcccaggaactgcccagagctggaggtgggccgggttgctgtaaggatcctggat
gaactggtgcttcccttccaggagcttcaaatagatgataacgaatacgcctgcttgaag
gccattgttttctttgatccagatgcaaaaggtctgagcgaccccggaaagatcaaacgg
atgcgataccaagtccaggtcagcctggaggactacatcaacgaccggcaatacgactgt
cggggacgttttggggagctgctactcctgctgcctaccctgcagagcatcacctggcaa
atgattgaacaaatccagttcgtcaaacttttcggcatggccaagattgacaatcttcta
caggagatgcttctcggaggctcggccaatgaagcgccacatgcacctcattctctccac
cctcacctggttcaagagcacctcagcagtaacgtcatcgtggccggcaacatgccgaca
cccatccataacggacaaatctccactccggaaaccccaataccgtctccgcccacagcg
tccagctcagaacattacaaaatagctcaaggggtcatagcaactgtccccaagcagcca
acctccatccctcagccgactattaccaagcaagaggccatctaa
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