Syngnathus scovelli (Gulf pipefish): 125988539
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Entry
125988539 CDS
T08785
Symbol
appa
Name
(RefSeq) amyloid beta (A4) precursor protein a isoform X1
KO
K04520
amyloid beta A4 protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125988539 (appa)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sscv00535
]
125988539 (appa)
00536 Glycosaminoglycan binding proteins [BR:
sscv00536
]
125988539 (appa)
Peptidases and inhibitors [BR:
sscv01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
125988539 (appa)
Proteoglycans [BR:
sscv00535
]
Cell surface proteoglycans
Others
125988539 (appa)
Glycosaminoglycan binding proteins [BR:
sscv00536
]
Heparan sulfate / Heparin
Others
125988539 (appa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
125988539
NCBI-ProteinID:
XP_049609806
LinkDB
All DBs
Position
2:complement(5000747..5023453)
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AA seq
768 aa
AA seq
DB search
MGDRMAIMLLAIAASTLAVEVPADGLTGLLAEPQVAMFCGKLNMHVNVQSGKWESDPSGT
KSCVGTKEGILQYCQEVYPELQITNVVEANQPVSIQNWCKKGRKQCRTHMHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDQCESHLHWHTVAKESCTDRTMNLHDYGMLLPCGIDRF
RGVEFVCCPAEAERDADSAEQDADDSDVWWGGAETDYSDNSMVREPEPTEQQEETKQSVL
EEEEATEEDDEDEDVLDNDQDGDGEEDEEDEEEEEDIADTLDADDDDEPTANVAMTTTTT
TTTESVEEVVRDVCWASAETGPCRAMLPRWYFDRQEGRCTQFIYGGCGGNRNNFESEEYC
RSVCRSVIPTATPGSSDAVDHYLETPADENEHTHFQKAKESLEAKHRERMSQVMREWEEA
EREAKNLPRADKKAVIQRFQEKVETLEQEAASERQQLVETHMARVEALHNDRRRLALESY
LTALQQDPPRPRHVFSLLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRPQVLTHLRV
IEERMNQSLGLLYKVPGVADDIQDQVELLQREQAEMAQQLANLQTDVRVSYGNDALMPDQ
ELGDGQTELLNQEDTLGLGGVGFIHPESFNQPNTDNQVEPVDSRPSLERGVPTRPVTGMK
MEAVPELRMEKGDRQSTEYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVM
LRKKQYTSIHHGVIEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcgaatggccataatgttactggccattgcggcttcaactctggcagtcgag
gtgcccgcagatggtttgacgggactgctggctgagccccaggtggccatgttttgtggt
aaactcaacatgcatgtcaatgtgcagagtggcaagtgggaatcagacccttcaggcacc
aagagctgtgttggtaccaaggagggcatcctgcagtactgccaggaggtttatccagag
ctccaaattaccaatgtggtggaggccaaccagccagtcagcatccagaactggtgcaag
aagggtcgcaagcagtgtcgcactcacatgcacatcgtagtgccctaccgctgtttggtc
ggagaatttgtgagcgacgccttgctggttccggataaatgcaagttcttgcatcaggaa
cgtatggaccaatgcgagagccacctgcactggcatactgtggccaaagaatcctgcaca
gacagaaccatgaatctccatgactacggaatgcttcttccatgcggtatcgaccgtttc
cgtggggtggaatttgtgtgctgtccagccgaggctgaacgcgacgctgacagtgctgag
caggatgcagacgattctgatgtttggtggggtggagcagagaccgactattccgacaac
agtatggtgcgggagcccgagccaacagagcagcaagaggaaaccaagcaatctgtgttg
gaggaggaggaggcaactgaggaagatgatgaagacgaggacgtgctggacaatgaccaa
gatggagatggggaggaggacgaggaggatgaagaagaggaggaagacattgctgacacg
cttgatgccgacgacgacgatgagccaaccgccaatgttgccatgacaaccaccaccacc
accaccaccgagtctgttgaggaggtcgtcagagatgtgtgttgggccagtgcagagact
ggtccatgccgggccatgctgcctcgctggtactttgaccgccaggagggccgctgtact
caatttatctacggcggctgcggaggcaacaggaataactttgagtcggaggaatattgc
cggtctgtctgcagaagcgtcatccccacagccacgcccggctcctctgacgctgtggac
cactacctggagacacctgctgatgaaaatgagcacacccatttccagaaagctaaagaa
agcttggaagccaaacaccgtgaaaggatgtcccaggtgatgagagagtgggaagaggct
gagagggaagcaaagaatcttccacgtgcagacaagaaagcagtcatccagcgtttccaa
gagaaggtcgagacattggagcaggaagcagccagtgaacggcagcagctggtggagact
cacatggcccgagtggaagctcttcacaatgaccggcgccgcctggctctcgagagctac
ctgacggctctgcagcaggaccccccaaggcctcgtcatgtcttcagcctgttgaagaag
tacgtgcgtgccgagcaaaaggacagacaacacacccttaaacattttgagcatgtccgt
atggtggacccaaagaaggcggcgcaaatcaggcctcaggttctgacccacttgcgtgtc
attgaagagcgcatgaaccagtcattgggacttctgtacaaggtacccggtgtggctgat
gacatccaggaccaagttgaacttttgcagagggaacaggccgagatggcccaacaactg
gccaatctgcagactgacgtgagggtgagctatggtaacgatgcactgatgcccgaccag
gagctgggagatggccaaaccgagctgctgaatcaggaggacacacttggcctcggagga
gtcgggtttatccatcccgagagcttcaaccagcccaacactgacaaccaagttgaacct
gtggactcgcgccccagtcttgaaagaggagtccccacacggccagtgaccgggatgaag
atggaagctgttcctgagctccgaatggagaagggggataggcagagtactgaatatgaa
gttcaccaccagaaactggtcttctttgccgaggatgtaggctccaacaagggtgccatc
attggcctcatggttggcggtgttgtcatagcaaccgtgatcgtcatcaccttggtgatg
ctccggaagaagcagtacacctccatccatcacggagtcatcgaggtggacgctgctgtg
acgcctgaggagcgccacctgtcgaaaatgcagcagaatggctatgagaacccaacctac
aagttctttgaacagatgcagaactga
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