Syngnathus scovelli (Gulf pipefish): 125988599
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Entry
125988599 CDS
T08785
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1 isoform X1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125988599 (fgd1)
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GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
FYVE_2
PH_11
PH_alsin
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
125988599
NCBI-ProteinID:
XP_049609922
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Position
2:9557074..9569305
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AA seq
948 aa
AA seq
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MNRTRSALPGLPPPPSPPPPSPPPLPSLSFSSHFSTMRFSYHLENSATSRTGPPSSLSPS
LLAKSLSLEPPCGTQQPTSSSSSPAGLQEEEVNDTGPPQLNKSRPPLLGPKPQVPPKPPH
LQQQVGALRTRPRAPDKPLPPPPPCKPPRPEDHASPTCVLSLIEKFEREQIIMVPDITGG
ALCPRLLDTPLSRPSSPSSSSAPAIPKEEEEGGLPELKCHDDVAQEREEPEGPEEPASAE
MNERRPSDQSGLPPERLSLPSSQTEGKLANRDSGIDSISSPSHSEELCFVGVDDTGGIGG
VYSCGLLRPSSSSSYTGEGEEGEARGVARRRDFSEDADSDLEEEEEELSELTLVLSAPRQ
DLAELSVQQRVFNIANELLHTEISYVSKLHLLDQVFCARLLEEARSRSSFPCDVIHGIFS
NICSIHCFHQQFLLPALQKRMEEWDSNPRIGDILQKLAPFLKMYGEYVKNFDHAMELVNT
WMERSALFKSIIHDIQRDERCANLTLQHHMLEPVQRIPRYELLLKDYLHRLPEDAPDYKD
AQKSLELIATAAEHSNAAIKKMERMRKLLKVYELLGGEEDIVNPTNELIKEGHILKLSNK
NGTSQDRYLILFNDRLLYCVPKLRLIGQKYGVRARIDVDGMELKEMSSAAVPRTFLVSGK
QRSLELQARTEDEKKDWIQAIQATIQRHEHTMETFRHLTCSLRDEESTPPHSPSCAELGK
RAPTPIREKEVTLCMKCQEAFNALTRRRHHCKACGHVVCGKCSEFRARLSYDNNRTNRVC
VDCYAMLVGVSPPPSVMAGSSQRRRSILEKQASLAAENSVMCSFLHHMEKGGGRGWQKAW
FVIPENEPLVLYIYGAPQDVKAQRSVPLIGFDVSLPESCDRLERRHTFKISQSHLTLYFS
ADGEELQRRWMDVLSRAGKGEEPQPHHPIVESVEEEGEEPEGTEGDNT
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggactcgcagcgctctgcctggcctccctcctcctccttctccacctcctccc
tctcctcctccgctgccttcattgtctttctccagccacttcagcaccatgaggttttcc
taccatctcgaaaacagcgccaccagcaggacaggtcccccgtcctccttgagtcctagc
ttgctggcaaagagtctctctctggagcctccgtgtggcacacagcagcccacctcctcc
tcctcaagtcccgctggactccaggaggaggaggtaaacgatacgggaccaccgcagcta
aataagagccggcctcctctgctaggaccaaagcctcaagtcccccccaagccaccccat
ttgcagcaacaagtgggagcattgaggacccgacctcgtgctccagacaaaccgctgccg
cctccgccaccctgcaagcccccccgtcctgaggaccatgcttcacccacctgcgtcctg
tcacttatcgagaagtttgagcgcgagcagatcataatggttcctgacatcaccggaggg
gccctctgtccccgccttctcgacacccccttatcgcgaccttcatctccatcgtcatcg
tcagctcctgccatccccaaggaggaggaggaggggggtcttcctgaactcaaatgtcac
gatgacgttgcacaggaaagggaggagccggaggggccagaggagccggcgtctgcggag
atgaatgagcgtcgaccgtctgaccaatccggtctgccgcccgagcgtttgtcccttccg
tcctcgcagacggaggggaagctggccaatcgtgacagcggcatcgacagcatcagctca
ccgtcacatagcgaggaactgtgctttgtgggtgtggacgacactggcggcattggtggg
gtttactcttgtggcctcctcagaccctccagctcgtcctcatacaccggcgagggcgag
gagggcgaggcgaggggtgtagccaggaggagggacttctcagaggatgcagacagcgac
ctcgaggaggaggaggaggagttgtccgagcttaccttagtgctttcagcccccagacaa
gacttggctgagctgtccgtccagcaaagggtgttcaatattgccaatgagctccttcac
accgagatctcctacgtgtccaaactccacttactggatcaggtcttctgcgcccgactt
ctggaagaagcacggtcccgttcttcttttccatgtgacgtcattcatggtatcttctcc
aacatctgctccatccactgcttccaccaacagttcctcctgccggccctgcagaagcgc
atggaggagtgggactcaaacccacgcattggagacatcttgcagaagcttgcacccttc
ttgaagatgtacggcgagtatgtgaagaactttgatcacgccatggagctcgtcaatacg
tggatggagaggtcggctctgttcaagagcatcatacatgacatccagagagacgagcgc
tgtgctaacctgacgctccaacatcacatgttggagccagtccaaaggattcctcgatat
gaactcctgctcaaagattatctgcaccgtctaccggaggacgcgccggactacaaggat
gctcagaagtctcttgagctcattgctacagcagctgaacattccaacgctgccatcaag
aagatggagcgaatgagaaagctgctgaaagtgtacgaacttctgggcggcgaagaggac
attgtgaacccgaccaatgagctcatcaaggagggacacattctcaaactgtccaacaag
aatggcacgtcgcaggatcgatacctcatcctgttcaacgacaggctgctctactgcgtt
cccaagctgcgtcttattggtcagaaatacggggtccgagctcgcatagatgtggacggc
atggagctgaaggagatgagcagcgccgcagttcctcggaccttcttggtgtctggcaag
cagcgttctcttgagcttcaggccaggacagaagatgagaagaaagactggatccaggcc
atccaggccaccatccagagacacgaacacaccatggagacatttcgtcacctgacttgt
tcgctacgagatgaagagtcaacacctcctcactccccgagctgcgccgaacttggcaag
cgtgcgcctacgcccatccgtgagaaggaagtgacattgtgcatgaaatgccaggaggca
ttcaacgctcttactaggcggcgccaccactgcaaagcctgcggtcatgtggtttgtggg
aaatgctcagagttccgtgcccgcctctcgtacgacaacaaccgcactaatcgtgtgtgt
gtggactgctatgctatgttagtgggggtgtctcccccgccgtctgtcatggccggcagc
agccagaggaggcgctccatcctggagaaacaagcctccttggcggccgagaacagcgtt
atgtgcagcttcctccatcacatggagaaaggaggcggacgaggctggcagaaagcctgg
tttgtcatccctgaaaacgaacccctggtcctctatatctacggagcgcctcaggatgta
aaggcgcagcgcagcgttcctctgattggctttgacgtttcgctcccggagtcatgtgac
cgcctggagcgtcggcacacctttaagatttcccagagtcacctgacgctctacttcagc
gcagacggcgaggaactccagcgtcgatggatggatgtgttgtccagggccggcaaaggg
gaggagcctcagcctcaccacccaatcgtagagagcgtggaggaagagggggaggagccg
gagggcacagagggcgacaacacgtga
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