Syngnathus scovelli (Gulf pipefish): 125988603
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Entry
125988603 CDS
T08785
Symbol
casz1
Name
(RefSeq) zinc finger protein castor homolog 1 isoform X1
KO
K25209
zinc finger protein castor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125988603 (casz1)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125988603 (casz1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
Phage_YorO
Motif
Other DBs
NCBI-GeneID:
125988603
NCBI-ProteinID:
XP_049609929
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All DBs
Position
2:19931224..19979575
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AA seq
2024 aa
AA seq
DB search
MPCFVERILPGQEGEVRQSVEGGLLPAERSLCTETTSGKPKMAAKRKGGLKLNAICAKLS
RQVVCDSSSQNAEGDQSIAENSERGSSHYDDNETNFHESLSLSQSLEEDQKRREAIEKWV
NGEYGEEPPALEGGDEQEHELQDGDDEDAPPVGVYMVQPKGCSDEEENNGEEAEPLLGSQ
DGSYRDDKDADDRLSKPDAYMPPSEAPSRQAPFSSPGEASALRDYAANTMNEFLGMFGYD
DHHMRDELNKKLSFDKLKAATSDPSSLSSEEASRRARFSKYEEYIRKLKAGENLPWPMHA
SPPKPDDLNSKLSQDKNSTMTQTSGGHPAAEAQIFPSSLDHKQQGGAPLAAAQSSNPSHL
QNMASRASKYDFFIQKLKMGESIQPNGNAFKRPSKYDLENVKFLNLFKPGDGSPDMGGAI
AFKTGKGGRPSKYDIRTIQKLMPGNPEGSLMPNILATAPGNPGAPGVPTIGTAGAGIAPG
LTVDQTGHISFTTSDYLKSSFSKTDSITTGTVSSVKNGLPPDKPASDDVNLYQKYIARFS
GSQHCGHVHCAYQYREHYHCMDPECNYQVSRFTSKQDVIRHYNMHKKRDNSLQHGFMRFS
PLDDCSVYYHGCHLNGKSTHYHCMQVGCSKVYTSTSDVMTHENFHKKNAQLINDGFQRFR
ATEDCGTVGCQFYGQKTTHFHCRRPGCTFTFKNKCDIEKHKSYHIKDDAYAKDGFKKFYK
YEECKYEGCVYSKATNHFHCIRSGCGFTFTSTSQMTSHKRKHERRHIRSSGVMGLSSTFL
APKDEPEESSNDDLMDFSAISSKNSSLSASPTTQQSTTVSHLMATPTTAVSSSSSMGLTL
KPTPSLPSVGQRMSSLLSQALPSNMPVALSLSSSTMAASSPFYSLIPRLPLQPPPHAAGL
LSAVTSGAHSMPTDSLAQGCSTAGAEGAMASTPTSFSSSSIIEKISTSKGLISPMMARLA
AAALKTSNGSDAGSGQPMSVSQFNLAQVKQEPVEVTSGALQDSTQEHSLDLSKKDNSNES
NGHDVPGNASLLSSLMNKMSQVNPALFNAMHLKTELEGGQSADNSEAPQYLSQVLRRPQV
DKPSEIWRTYLRRFDTDDFCEAQCDFLQKVHFHCLVEDCGALFSTVDGAIKHANFHLRAT
LKVKSEPPFSEGKVSGEGGPLRPAAPVSMANNPSMDVTHLPSGGYSSPPPSLLAWKQLTG
SIPQMPASMPNLPANSPLATTSLENAKPQVKPGFLQFQENDPCLATDCKYSNKFHFHCLF
GNCKYVCKTSGKAESHCLDHINPNNNLVNVRDQFSYYSLQCLCPNQHCEFRMRGHYHCLR
PGCYFVTNITTKLPWHIKKHEKAERRAANGFKYFTKREECGRLGCKYNQVNSHFHCIREG
CQFSFLLKHQMTSHARKHMRRMLGKNFDRVPSQVMPLSHRTDEMHHGSGMASGAMAAHSD
ITSSYSSATVEEADDYVDYMGGGGSPLGISSESSNQDRSCTSTPVGNDGSPAGQGCPTTT
TTTSAPTTPADTSQNAPPSSPPPAPLPPPPLPPPPSVPQAGLPAQATSLSPALLRPPLPS
LPYLLSPSCLSYSLLSASLGATLSVVMPTNTPAYSPVIATPSPVKNDVPIVQDAAGNTIS
IPTAAGAKKRFWIIEDMSPFGKRRKTASSRKMLDEGMMLEGFRRYDLYENCKDSGCQFSL
KVTHYHCTRENCGYKFCGRTHMYKHAQHHDRVDNLVLDDFKRFKSTLSCNFLDCQFSGNS
THFHCLRCGFRCTDSTKVTAHRKHHGKQDVISAAGFCQFSSSVDCEVPDCKYKLKCSHFH
CTFPECKHTVVGMSQMDSHKRKHEKQERGELPSVSPKQEAMHHLGPSAGTQASIALNASR
GLTHPANHSAAPCMLYSGGSGRAEYNHPYPPSTISLDSSLNLGTDTSSSLFFLKNATGLG
LNDSLDLSKKVHQEAARHTPGHSMPSGMLAAQDDTSGTSGEAEDDLSPEEEARAEDEEDE
EEEDDDDDAEEELNTDSNDDSAAEPEEKDKGQSFDASVHHTDTS
NT seq
6075 nt
NT seq
+upstream
nt +downstream
nt
atgccttgttttgtggagagaatccttccagggcaggagggagaggtgaggcagagcgtg
gagggcggtctgctgccagctgaaaggagtttatgcactgaaacgacctcaggaaaaccc
aagatggccgccaaaaggaaaggtggcctaaaactcaatgctatctgtgccaagctgagc
cgccaggtggtgtgcgacagtagctcacaaaatgccgaaggagaccagagcatagctgaa
aacagcgagcgcggcagttcccactacgatgacaatgagaccaacttccatgagagcctg
agcttgagtcagagcctggaggaggaccaaaagagacgcgaggccatcgaaaagtgggtg
aatggcgagtatggcgaggagccgccggcgctcgagggcggcgacgagcaggagcacgag
ctccaagacggcgacgacgaagacgccccacccgtaggtgtctacatggtccagcccaaa
ggctgcagcgacgaggaggagaacaacggcgaggaggcggagcccttgcttggctctcag
gatggcagttaccgcgacgacaaagatgctgacgacaggctttccaagcctgacgcctac
atgccgccaagcgaggccccgagccgccaagcacccttctcctctccaggtgaagcatct
gccctccgagactacgcagccaacacaatgaacgagtttttgggaatgttcggctatgat
gaccatcatatgcgggatgagctaaacaagaagctcagctttgacaagctcaaagccgct
acctcagacccctcatccctcagcagcgaagaggcctctcggcgagctcgcttctccaag
tatgaagagtacatccgaaagctaaaggctggcgagaacctaccttggcccatgcatgct
tccccacccaaaccagatgacctcaattcaaaactgtcccaagacaaaaattcaaccatg
acccagacctccggtggccacccagcggccgaggctcagatcttcccctcgagcttggat
cacaagcaacaaggaggagctccattggctgccgcacagtcatctaatccctctcacttg
cagaacatggcctcccgagcctccaagtatgacttcttcatccagaaactaaaaatgggg
gagagtattcagcccaatggtaatgcttttaaacgaccctccaaatatgacctggagaac
gtcaagttcctgaaccttttcaaaccaggtgacggtagccccgacatgggcggcgccatc
gcctttaaaaccggtaaaggtggccgcccttccaaatatgacatcagaacaatccagaag
ctaatgccagggaatcccgaaggctcgctcatgcccaacatccttgcaaccgcaccgggg
aaccctggagctcctggtgtacccaccattggcacagctggggccggcattgcaccggga
ctcaccgtggaccagacgggccatataagcttcaccacatctgactacctgaagtccagc
ttttccaaaactgactccatcaccactggcaccgtgtcctccgttaagaatggcctgcca
cccgataaacctgccagcgacgacgtcaacctctaccagaaatacatcgccaggttttcc
ggaagtcaacactgtggccatgtgcactgtgcctaccagtacagggagcactaccactgc
atggaccccgagtgtaactaccaggtgagcaggtttaccagtaaacaggatgtgatcagg
cactacaacatgcacaagaagagggataactccctgcagcacggtttcatgcgcttcagc
cctctggatgactgcagcgtctactaccacggctgccacctcaatggcaaaagtacccat
taccactgcatgcaggtgggctgcagcaaggtgtacaccagcacctcggatgtcatgacg
cacgaaaatttccacaaaaagaatgcccagttgatcaatgatggcttccagaggttccgt
gcaacagaggactgcggcacagtcgggtgccagttttatggccagaaaacaacgcacttc
cattgcaggcgccccggctgcacgttcaccttcaagaacaagtgtgatatcgaaaagcac
aagagctaccacatcaaggatgacgcctatgccaaagatggcttcaagaagttctacaag
tatgaggagtgcaagtatgagggctgcgtgtacagcaaagctaccaaccactttcactgc
atccgctcgggctgcgggttcaccttcacctccaccagccagatgacctcccacaagcgc
aaacacgagcgccgacacatccgctcctccggcgtcatgggcctctcttccaccttcctg
gccccgaaagacgagccggaagaatcgagcaatgacgacctgatggacttctcggcaatc
agcagcaagaactcaagtctgagtgcctcgcccaccacccagcagtccaccactgtatcg
cacctcatggccacacccactactgccgtctcctcctcctcatcgatgggcctcaccctc
aagcctacgccctcgctgcccagcgtcggccagcgtatgtccagcctgctgtcccaggcc
ctgcccagcaacatgccggtggccctctctctgtccagcagcactatggctgcttccagc
cccttctactcgctcatacccaggttgcctctccagcctcctccacatgccgctggcttg
ttgtcagctgtcacatcaggggcccactctatgcccaccgactcgctggcccaaggctgc
tctacagcgggggcggagggagccatggcatccaccccgacctccttctccagctcctcc
atcatagagaagatctccactagcaaaggtctgatatcacccatgatggccaggctggcc
gctgctgcgctgaagacttccaatggatcggatgcagggagcgggcagccgatgtcagtc
agccagttcaatctggctcaagtgaaacaggaaccagtggaagtcacctcgggggccttg
caggactccacacaggaacacagtttggacctgagcaagaaagacaacagtaatgaatca
aatggacatgatgtaccagggaatgcatctcttttatcctcgcttatgaataagatgtca
caggtgaaccctgcactcttcaacgccatgcacctcaagacggagctggagggcggccag
agcgccgataactcggaggcgccccagtacttgagccaagttctgaggaggccccaggta
gacaagcccagcgagatctggaggacttacctccgcaggtttgacacagatgacttctgt
gaggctcagtgtgacttcctccagaaagtgcactttcactgcctggtagaggactgcggt
gctctcttcagtactgtggatggagccataaaacatgcaaatttccaccttcgagccact
ttgaaagtgaagtcggagcctccgttcagcgagggcaaagtatctggagagggtggtcct
ctgcgacccgcagcccccgtctccatggccaacaacccctccatggatgtgacgcatctc
ccctctggtggctatagctcgcctcccccctccctgctggcctggaagcagcttaccggc
agcatcccccagatgccggcctccatgcccaacctgcctgccaactcccctctggccacc
acctcgctggagaatgcaaagccacaagtcaaacctggttttctgcagttccaggaaaac
gacccttgtttggcaacggactgcaagtactcaaacaagttccacttccactgcttgttt
gggaattgcaagtacgtgtgcaagacatctggcaaggccgagtcccactgtttggaccac
atcaaccccaacaacaacctggtcaacgtccgtgaccaattttcctactactcccttcag
tgtctgtgtcccaaccagcactgtgagttccgaatgcgcggccactatcactgtctgcgt
cccggctgctacttcgtcaccaacatcaccaccaagctgccgtggcacatcaagaagcac
gagaaggccgagcgtcgcgccgccaatggcttcaaatatttcaccaagagggaggagtgc
gggcggctgggttgcaaatataaccaagtcaacagccactttcactgcatccgcgagggc
tgccagttctccttcctcctcaagcaccagatgacgtctcacgcacgcaaacacatgagg
cgcatgctggggaagaactttgatcgtgtcccatcccaggtgatgcccctgagtcacaga
actgatgaaatgcatcatggctcgggaatggcgtcgggggctatggcggcccactctgat
atcacttccagttactcctccgccaccgtagaggaagctgacgattacgtcgactacatg
ggaggcgggggcagccccttgggcatctcctccgagtcgtccaatcaagaccgtagctgc
accagcaccccagtgggcaacgatggctccccagcaggacaaggctgccccaccaccacc
accaccacctctgctcccaccactcctgctgacactagccaaaatgctcctccttcctca
cctcctcctgctcctcttccaccaccgccacttccacctcctccttccgtacctcaagct
ggcctgccggcccaggctacttccctgtctcctgctctgctccgaccacccctgccctcg
ctcccataccttctctctccatcctgtctgtcatactctctgctcagcgcctctctggga
gccactctgagtgttgtcatgccaaccaacacaccagcttacagccccgtcattgccact
ccatcgccggttaaaaatgacgtccctatagtgcaggacgccgcaggaaacaccatctcc
atccctaccgccgccggagccaagaagcgcttctggatcatcgaggacatgtccccgttt
ggcaagcgccgcaagaccgcttcctcgcgcaagatgctggacgaggggatgatgctggaa
ggcttccgccgctacgacctatacgagaactgcaaggactcgggctgccagttctccctg
aaggtgacccactaccactgcacccgcgagaactgcggctacaagttctgtggccgcacc
cacatgtataagcacgcccagcaccacgaccgcgtggacaacctggtcctggacgacttc
aagaggttcaagtccacactgagctgcaacttcctggattgccagttctcgggcaacagc
acccacttccactgcctgcgctgcggcttccgctgcaccgatagcaccaaggtgacggcc
caccgcaagcaccacggcaagcaggacgtgatcagcgccgccggcttctgccagttcagc
tccagcgtcgactgcgaggttcccgactgcaagtacaagctcaagtgctcccacttccac
tgcaccttccctgaatgtaagcacacggtggtggggatgtcccagatggactcgcacaag
cgcaagcacgagaagcaagagcggggcgagctgccgtccgtttcgcccaaacaggaagcc
atgcaccacctgggcccctccgctggcactcaagcctccatagctctgaacgcatcccgc
ggactgacccaccctgccaaccacagcgccgccccctgcatgctctactcgggcggcagc
ggcagggcagagtacaaccacccatacccgccgtccaccatcagcctggacagctctctc
aacctgggcaccgacaccagcagctccctgttcttcctcaagaacgccaccggtctgggt
ctcaacgactctctggacctgagcaagaaggtccaccaggaggcggcgcgacacacaccg
ggccacagcatgccatcgggcatgcttgcggctcaggacgacacctccggaacatccggg
gaggccgaggatgatctgtcgcccgaggaggaggcgagggctgaggatgaagaggacgaa
gaagaagaagacgatgacgacgatgcggaggaagaactcaacaccgattcaaatgatgat
tcggcggcagagcccgaagagaaggacaaagggcagagttttgatgcttccgttcaccac
actgatacttcctaa
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