Syngnathus scovelli (Gulf pipefish): 125988631
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Entry
125988631 CDS
T08785
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125988631
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRCT_2
LRRNT
Hepsin-SRCR
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
125988631
NCBI-ProteinID:
XP_049610020
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Position
2:complement(5627189..5632857)
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AA seq
875 aa
AA seq
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MHFWALNIILVIASSLWLVEMYDNYGEICRNLCTCDEKESILTVSCENRGIIRVTEISPV
QFPAYHLLLTGNLLKKLSVNDFINYTGVTILHLGNNDISEIETGAFNGLQGLKRLHLNNN
KIDILRDDTFAGLESLEYLQIDYNYISNIEPNTLSKLHQLTVMILNDNLLSFLPPNIFRN
VPLTHLDLRGNRLKMFPYVGLLEHMDKVVELQLEENPWNCSCELIALKAWLESIAYTALV
GEVVCETPFRLHGRDLDEVSKQELCPRRPQEDSGRQAPPSSTNGYYQTTPAAATSSATSS
AVFRSSSRPTKGTRQFNRTRLKPTSRLPGGSPYNYGPIIAFQTKSPVPLDCPTACTCNLQ
ISEIGLNVNCQERKIENISDLKPKPYNPKKMYLTGNYIPVVRRSDFIDAVGLDLLHLGNN
RITVIHDRAFGDLTNLRRLYLNGNLMDRLTGEMFFGLQNLQYLYLEYNKIKEVDSGTFRY
LTNLQLLFLNNNLLKTLPVGIFSSLSLSRLNLRNNQFQNLPVSGVLDQLKLLVQIDLFEN
PWDCSCDLVGMKMWLEQLSAGTVVNEIVCETPKRHTKMDLRSISSEQLCPDNSDTYVSPT
PPTEEPLDDRAILTDAPHKFNSSSSTVPLSVLILSLLLVFIMSVFVAAGLFVVVMKKRKK
SQSDRTSTNNSDVSSFNLQYSLYSNRSGTKVKAPAGHVYEYIPHPMGHMCKNPIYRSREG
NAVEDYRDLHELKVTYRSTPDDERNRSMMRSPAFSVSTIEPMDNPSPVQDADHFFRGILE
ADKQSPHQSIPSLPVAGNVEYKYTGPVSYTYNPNFDVRRQFLHPDRIRETVLYGTSPSTV
YVEPNRNEYLELKAKLQSEPDYLEVLEKQTTFSQF
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcatttctgggccctgaatataatccttgtgattgcatcatctctgtggctggtcgag
atgtatgacaattacggggagatctgccgcaacctgtgcacatgtgacgagaaggaaagc
atcctaaccgtcagctgcgagaaccgaggaatcatcagagtgacggagatcagcccggtt
caattccccgcttaccacctcctgctgacggggaacttgctgaaaaaactgtcggtcaat
gattttatcaattacactggagtgaccatcctgcacttggggaacaatgacatctcagaa
attgaaacaggtgccttcaacggactccagggattaaagaggttgcacctgaataacaac
aaaattgacattctgagagatgacacgtttgcaggactggaaagtttggaatatctacaa
attgattataattacatcagcaacattgagcccaacaccctgagcaaactgcaccaactg
acagtgatgattctgaatgacaacctactctctttcctgcctcccaatatatttcgcaat
gtcccattgacgcatttggacctgcgggggaaccggttaaagatgtttccatatgttggc
ctcctagagcacatggacaaggttgtggaattacagctcgaagagaatccatggaactgc
tcatgcgagctgatcgctctcaaggcctggctggagagtattgcctacacggctcttgtg
ggtgaagtggtctgtgagacacccttcaggctgcacgggagggacctggatgaggtgtcc
aagcaggaactatgcccaaggaggccccaagaggactcgggaaggcaagcgcccccaagc
agcaccaacggatattaccagaccacaccggctgctgccacatcctcagccacctcatct
gctgtctttaggtcctcttccagacctaccaagggcacacgacaatttaatcgaactagg
ttaaagcccacttcacgactcccaggcggtagcccttacaactatggccccatcattgct
tttcagaccaaatcgcctgtgcctttggactgccccactgcttgcacgtgcaacctgcag
atatccgaaattggattgaatgtaaattgccaagagagaaagatcgaaaacatctctgac
ctaaagcccaagccatacaatccgaaaaagatgtatctgacgggaaattatattcccgtg
gtacgaagatcagattttatcgacgccgttggattggatttgcttcacctgggaaacaac
agaataaccgtgatccatgacagggcttttggggatttaacaaatctgcgtaggctgtat
ttaaatggtaatctcatggacaggctcacaggggaaatgttttttgggttgcagaatttg
caatatctttatttagagtacaataaaatcaaggaggttgactctggcacatttcgctac
cttaccaatctccagctgctatttctcaataataacctcctgaaaacattaccggtgggc
attttttccagcctctccttgtctcgactgaatttgcgcaacaaccagtttcaaaacctg
cctgtaagcggtgtgttggatcagctcaagctactggtgcagatagatcttttcgaaaac
ccctgggactgctcctgtgatttagtgggtatgaagatgtggcttgagcagctcagtgca
ggtacagtggtcaacgagatcgtgtgcgagacacccaaacgtcacacaaaaatggacctt
cgctcgatctcatcggagcagctgtgccctgacaactctgatacctatgtctcaccaacc
ccccctaccgaggagccattagacgaccgggccatcctcacagatgccccacacaagttc
aactcctctagcagcactgtacccctgtcagtcctaatcttgagcctcttgcttgtcttc
ataatgtcagtctttgtggcagcaggcttatttgttgtggtgatgaagaagcgcaaaaaa
tcccagagcgaccgcaccagcaccaacaactctgatgttagctccttcaacttgcagtac
agcctctacagcaaccgttctggcaccaaagtgaaggcaccggctggtcacgtttatgag
tacattccacatccgatgggtcacatgtgcaaaaaccccatttacagatcaagggaagga
aatgcagtggaggattaccgtgaccttcacgagctcaaggtgacttacagaagtacccca
gacgatgagaggaatcgcagcatgatgaggagccctgcgttcagcgtgagcaccattgaa
ccaatggacaacccctctccagtccaggatgcagaccatttctttagaggcatccttgag
gctgataagcagtcccctcatcagtccatcccatcccttccagttgcgggaaatgtagag
tacaaatacacaggcccagtgtcatatacctacaacccaaattttgatgtcaggcgtcag
ttcttgcacccagacaggataagagaaacggtgctctacggcacgtcacccagtactgtt
tatgtggaacccaacagaaatgaatacttggagctaaaagcaaaactgcagtctgagcct
gattacctcgaagttcttgagaaacagaccaccttcagccagttctga
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