Syngnathus scovelli (Gulf pipefish): 125988651
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Entry
125988651 CDS
T08785
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125988651
04082 Neuroactive ligand signaling
125988651
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125988651
Ion channels [BR:
sscv04040
]
Ligand-gated channels
GABA-A
125988651
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
125988651
NCBI-ProteinID:
XP_049610052
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Position
2:complement(5984678..6027540)
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AA seq
536 aa
AA seq
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MKRNMFLWWIIALFNHYFIRHIQAELPFISGNDATMLVNWNAVDGNKKLFAIYDTSGVNE
PGNMSFVKETVDKLLKGYDIRLRPDFGGAPVEVGMSIDVASIDMVSEVNMDYTLTMYFQQ
YWRDKRLAYVGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVL
YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIKFYWKGGESAVTGVTRIELPQ
FSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYD
ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLEYAFVNYI
FFGRGPQMQKKLAEKAEKANNERAAKYDAAREAGSRAASLKRSNQIRGLRHSRSAEPGHG
NILLTTLEIHNEVAGGEITTSVADIRNSQSMVQLDSTASSHIQYRKQSGGIGPRSASRHS
LDRSVQKKRSRLRRRSSQLKIKIPDLTDVNAIDRWSRIIFPSVFSFFNLIYWLYYV
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaacatgttcctttggtggatcatagcactttttaaccactacttcatacgt
cacatccaagcagaacttccttttatatcagggaacgatgctacaatgctggtcaactgg
aatgccgttgacggaaataagaagttgttcgccatctatgacacaagcggtgtcaacgag
cctggtaacatgtcattcgtgaaggagacggtggataaactcctcaaagggtacgacatc
cgactgaggccagactttggaggggccccggtagaagtggggatgagcatagatgtggcc
agcatagacatggtgtctgaagtcaacatggactacactttgactatgtatttccaacaa
tactggcgagacaaacgacttgcctatgttggaatcccgctcaacctgaccttggataat
agagtagcagaccagctctgggtaccagacacttatttcctcaacgacaagaagtcattt
gttcacggtgtcaccgtcaaaaatcgaatgatccgtcttcatccggatggaaccgtactt
tatggcctcaggataactacgacagcagcatgcatgatggatctcaggaggtatcccctg
gatgagcagaactgcactctggagatagagagctatggctacaccacagacgacattaag
ttctactggaaagggggcgagtcagccgtcacaggggtgacgcgcattgagctgccgcag
ttttccattgttgattacaagttggtttccagaaatgttgtgttttccacaggtgcttac
cctcggctttctctgagctttaaacttaagagaaacatcggctatttcattctgcagacg
tacatgccatccatcctgattaccatcctctcgtgggtatccttctggataaactacgac
gcctcggcggccagggtggctctaggtatcaccacggtgctgaccatgaccactatcaac
acacacttgagagagacgctgcccaagatcccctacgtgaaggccatcgacatgtacctg
atgggctgctttgtcatggttttccttgcccttctggagtatgcctttgtcaactacatc
ttctttggaagggggcctcagatgcaaaaaaagctggcggagaaggctgagaaagccaac
aatgagagagcagccaagtatgacgctgcaagggaggcaggtagtagggctgcatccctt
aaacggtccaatcagattagaggccttcgccactcacgctcggcggaaccaggacatggg
aacattctgctgaccaccttggaaatccacaatgaagtggccggaggcgagattaccacc
agcgtagcagacatcaggaactctcagtccatggtgcagctggacagcacagcctcatcg
cacattcaatatcgcaagcagagcggtggaatcggtccacgttcagccagtcgtcattcc
ctagatcggtctgttcagaagaaacgcagccgactgagaaggcggtcctcgcagctaaaa
atcaaaatccctgatctgaccgacgtgaacgccatcgaccgttggtcacggatcatcttc
ccctcagttttctccttttttaatcttatctactggctctattatgtctga
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