Syngnathus scovelli (Gulf pipefish): 125988798
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Entry
125988798 CDS
T08785
Name
(RefSeq) parapinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sscv04030
]
125988798
G protein-coupled receptors [BR:
sscv04030
]
Rhodopsin family
Vision
Opsin
125988798
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srw
7tm_4
TAS2R
7TM_GPCR_Srt
Motif
Other DBs
NCBI-GeneID:
125988798
NCBI-ProteinID:
XP_049610410
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Position
2:complement(21836204..21838227)
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AA seq
290 aa
AA seq
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MEHLDPHGNFSVSGSVADAKVLSRSGYTTLAVIMGIFSILGIILNILVIVVTVRHKQLRQ
PLSYALVSLAVCDLGCAVFGGLPTTVTTAMGYFSFGRLGCILEGFAVAFFGIASLCTIGV
ISVERYIVVCYPMGAALFQTRHAIAGVVLSWVWSFVWNTPPLFGWGSFELEGIKTSCAPN
WYSRDAGNMSYIVIYFLLCFALPFSIIAVSYLRLLWTLRQVTKRQVSETGSTHRMEVQVA
RMVVAMVLAFLVTWLPYASMALAVVIDSTLKIDPLIATIPRKNQYNSLPT
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggagcacctcgacccccatggaaacttctctgtctctggtagcgtagccgatgcaaag
gtcctttcccggagcggctacaccacactggctgttatcatgggcatcttctctattttg
gggatcattctcaacattctggtgattgtggtgacagtgagacacaaacagctgaggcag
ccactcagctacgctctggtcagcctggctgtatgtgacctgggctgtgctgtgtttgga
ggtttgcccaccacagtgaccaccgccatgggatacttcagctttggacgactgggatgc
atattggaaggctttgctgtggccttttttggtatagcaagcctgtgtacgatcggagtc
atttctgtggagcgctacatagtggtgtgctatccgatgggtgccgccctcttccagacc
aggcatgcaatcgcgggcgtggtgttgtcttgggtgtggtcctttgtgtggaatactcca
cctttgttcggttggggcagttttgagctggagggcatcaaaacctcctgcgcacccaac
tggtacagccgggacgcaggcaatatgtcctatatagtcatttactttttactttgcttt
gctctgcccttttccatcattgcggtgtcttacctgcggctgttgtggaccctccggcag
gtgaccaagcggcaggtgtccgaaactggcagcacacaccgtatggaagtgcaagtggca
cgtatggttgtcgccatggtgcttgctttcctggtgacttggctgccgtatgccagcatg
gccctggctgtcgtcatagattccacgctcaaaatcgatcctctaattgctaccatacca
agaaagaatcaatataattccctcccaacttga
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