Syngnathus scovelli (Gulf pipefish): 125988875
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Entry
125988875 CDS
T08785
Symbol
mib2
Name
(RefSeq) E3 ubiquitin-protein ligase MIB2 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125988875 (mib2)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125988875 (mib2)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125988875 (mib2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIB_HERC2
Ank_2
SH3_15
Ank
Ank_5
Ank_4
Ank_3
zf-C3HC4_3
Ank_KRIT1
ZZ
Motif
Other DBs
NCBI-GeneID:
125988875
NCBI-ProteinID:
XP_049610549
LinkDB
All DBs
Position
2:21713330..21749758
Genome browser
AA seq
1040 aa
AA seq
DB search
MALPRHTGIQLPDMFKIGLKTIGIAPDLLLEPPLVPSLPALSSVRASGKARRRSSSESAA
RRQPLSAAPKPLGAGRGSMEVGMRVVRGTDWKWGNQDDGEGHVGTVVEIGRQGSTTTPDK
TVVVQWDSGTRTNYRTGYQSAYDLLLYDNAQIGVRHSNIICDSCKKHGIMGMRWKCKVCF
DYDLCTHCYMNNKHDLSHSFERYETAHSQPVSLAPRQNLPRFILKGIFQGVKVVRGPDWD
WGNQDGGEGKVGKVVDIRGWDTESGRSVASVTWTNGTTNVYRMGHKGKVDLKYVSDGQGG
FYYKDHLPVLGEHAELQRQESADGHSFQQGDKVKCLLEVDILRQMQEGHGGWNPKMAEYI
FRIGTVHRITDRGDVRVQYSNNIRWTFHPGALTKVNTFGVGELVRVLEDIDSVKRLQSGH
GEWTDSMSPVLGQVGKVLKVYADGDLRVAFSSQTWTFNPACLSAQPVEVDANLMTTENPN
ESGSTVISVLEKLLSQSTEQDNPSRLVIEAAQGSANKVRELLQKYPDKVDIKNQGKTALQ
VAAHQGHMEVVKALLQANSAVEVKDEDGDTALHYTAFGNQAEIARLLLSKGANVNLLNNS
MCTALHIAVNKGFTDVVRVLTEHSADVNLQDSYGDTPLHDAIAKDFRNIIEILVVVPNID
FTQQNHRGFNLLHHAALKGNKLATEKILGRARQLVDVKKDDGFSALHLASLNNHRDVAEI
LIKEGRCDINIRNNRNQTPLQLAVTQGHTDLIQLLVVEGANVNMEDEDGDTAMHVALLRP
QLANVMLGPAMGSSSSTSTEESGEGCSSTSLYCRLNASGLLGNTELSVGMAIACFLAQEG
ADISYANHKGKSPLDLVADSTMLQLIKSFSEKYRLQRLQAITCGQGPSAANLRRVHTTPN
TMTNLVLPTLPGPSECLICSELALLVLFCPCQHSVACEECAHRMKKCIKCQVTITKKIRQ
DQTEVDCSPGTENSEQHNLLEQLQSRYRQMEERITCPICIDNQIKLVFQCGHASCIDCSA
VLKACPICRQTIRERIQLFV
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgccacggcacactggaattcagctgcctgacatgttcaaaattggactgaag
acaattgggattgcccctgatctactgctggaacctcctctggtaccatccctgccagca
ctgtcatcagtgcgggccagtgggaaggcccggaggcgcagcagtagtgagagtgctgct
aggcgtcagccattgagcgcagccccgaagccgctgggcgctggtagaggcagcatggag
gtgggcatgcgggtcgtccgtggcacggactggaaatggggaaaccaggacgatggcgag
ggccacgtcgggaccgtggtggagattgggcggcaaggcagtaccaccaccccagacaag
acggtggtcgttcagtgggacagcggcacaaggaccaactaccgcactggttaccagtct
gcctacgacttgctgctctacgacaatgctcaaattggggtgcgtcactcaaacatcatc
tgcgacagctgcaagaagcatggcatcatgggaatgcgatggaagtgcaaagtgtgcttt
gactatgacctgtgcacacattgctacatgaacaacaaacatgacctgagccactcgttt
gagcgttatgagacagcgcattctcagccagtaagcttggcaccgaggcagaacctccca
cggttcattctcaaaggaatcttccagggtgttaaagtggttcgtggacctgactgggac
tggggaaaccaagacggcggggagggtaaggttgggaaggtagtggacattcgtggctgg
gatactgagtctggtcgcagcgtggctagtgtgacctggactaatggcactaccaatgtc
taccgaatgggccataagggcaaagtggacctcaaatacgtgtctgatggccaaggaggc
ttctactacaaagaccatttgccagtccttggagagcatgcagagctgcagcgccaggag
agtgctgatggccactctttccagcagggtgacaaggtcaaatgtctcttggaggttgat
attctgcgacagatgcaggagggccatgggggatggaatcccaaaatggcagagtatatt
ttccggatcgggacagttcatagaatcactgaccggggagatgtcagagtccaatacagc
aacaacatccgctggacttttcatccgggggccctcaccaaggtgaacacgtttggggtt
ggtgaacttgtacgagtattggaggacattgatagtgtcaagagactgcagtccggccac
ggggaatggacagacagcatgtctcccgtgctcggccaggttggtaaggtgctgaaagta
tatgcagacggtgacctccgtgtggcgttttccagtcagacgtggacgttcaacccggca
tgtctctcggcccagcccgtggaggtggatgccaacctcatgacgaccgagaaccccaac
gaatctggaagtacagtcatttctgtgttggagaaactgctatcccagtccacagagcag
gacaatcccagccggctcgtcattgaggcagcacaaggcagtgccaataaagtcagagag
ttgttgcaaaagtatcctgataaggtggacatcaagaaccaggggaagacagcgctgcag
gtcgccgcacaccaaggccacatggaggtggtgaaggccctgctccaggccaacagtgcc
gttgaagtcaaggatgaagatggagacacagcgttacactacacggcctttggtaaccag
gcagagattgcacggctactgttgagcaaaggagcaaatgttaacctcctgaacaactcc
atgtgtacggcgctccacattgctgtcaacaagggcttcacagatgtcgtgcgcgtactc
actgaacattccgccgatgttaatctccaggattcttatggggacacacctctacacgat
gccattgcaaaagatttccgcaatatcattgagatcctggtagtggtgcccaacatagac
ttcactcaacaaaaccacagaggattcaacctcttgcaccatgctgcactcaaaggaaac
aaactggccacggagaagattctagggcgagcgcgacaattggtggatgttaagaaggat
gacggcttttccgccctgcatctggcctccctcaataaccaccgtgacgttgctgagatc
ctcattaaagagggacgctgtgacatcaacatccgcaacaaccgaaaccagacgccgctg
cagctggcagtgacgcagggccacaccgatctgatccagcttctggtggtcgaaggcgcc
aacgtgaacatggaggatgaggatggcgacacagccatgcatgtggctctgctgcgacca
cagctggccaatgtgatgctaggccccgctatgggaagcagcagcagcacgagcacagag
gagagcggcgagggctgttcctccacgtctctctactgcaggctcaatgcttcgggcctt
ctcggaaatacagagctcagtgtcggaatggcgattgcttgcttcctggcgcaggagggg
gctgatatcagctatgccaaccacaagggaaagagccccctggacctggtggcagacagc
accatgctgcagctcatcaaaagcttctcagagaagtacagattgcagcgcctgcaagct
ataacttgtggccagggcccaagtgctgctaacctgcgccgtgttcatactacgcccaac
accatgaccaatctggttcttcctacgctgccgggtcccagtgaatgcctcatctgctct
gaactggctctgctggttctcttctgcccctgccagcatagtgtggcctgtgaagagtgt
gcccatcgaatgaagaaatgcattaaatgccaagtcacaatcaccaagaaaattcgacaa
gaccaaaccgaggtggactgtagccccggtacggagaattcagagcagcacaacctgctg
gagcagctccagtctcgctaccggcagatggaggaacggatcacctgccccatctgcatc
gataaccaaatcaaactggttttccagtgcggacacgcctcctgcatcgactgcagcgct
gtgctcaaagcttgcccaatctgtcggcagaccatccgtgaacgcattcagttgtttgtc
tga
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