Syngnathus scovelli (Gulf pipefish): 125988915
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Entry
125988915 CDS
T08785
Symbol
ppardb
Name
(RefSeq) peroxisome proliferator-activated receptor delta b isoform X1
KO
K04504
peroxisome proliferator-activated receptor delta
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03320
PPAR signaling pathway
sscv04148
Efferocytosis
sscv04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125988915 (ppardb)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125988915 (ppardb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125988915 (ppardb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125988915 (ppardb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sscv03310
]
125988915 (ppardb)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125988915 (ppardb)
Nuclear receptors [BR:
sscv03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
125988915 (ppardb)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125988915
NCBI-ProteinID:
XP_049610665
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Position
2:22505329..22511738
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AA seq
498 aa
AA seq
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MEGLQQPSPKKHNRVNGYCQPSSPEDAAAVKWPRGESQGSDSSKGASASEHADLDEPKGP
ERHVEIKEELEDASARRGKQEKAGNADEENNHSSAASSYTADLSHTPSASLSEQLRLGRE
DTTASGISVECKVCGDKASGFHYGVHACEGCKGFFRRTVRMKLEYERCERSCKIQKKNRN
KCQYCRFQKCLSLGMSHDAIRYGRMPEAERKKLVAGLLADELNLCKPGGSDLKTLAKQVN
TAYLKNLSMTKKRARSILMGKTSSTSPFVIYDVDTLWKAESGLVWSQLLPGAPLTKEIGV
HVFYRCQCTTVETVRELTEFAKSIPGFVDLFLNDQVTLLKYGVHEAIFAMLPSLMNKDGL
LVANGKGFVTREFLRSLRKPFSEIMEPKFEFAVKFNALELDDSDLALFVAAIILCGDRPG
LMNVKQVEQSQDNILQALDLHLQANHSDSVYLFPKLLQKMADLRQLVTENAQLVQKIKKT
ESETSLHPLLQEIYKDMY
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggagggcttacagcaaccttctcccaagaagcacaacagggtcaatggctactgccag
ccaagttcacccgaggatgcggctgctgttaagtggcctcgaggggaatcccagggctca
gacagcagcaagggtgcgagtgcatcggaacatgcggacctggatgagcccaaaggtccc
gaaagacacgtcgagatcaaagaggagctggaggacgcgtctgctcggcgaggcaagcag
gagaaagcagggaatgcagatgaagaaaacaatcacagcagtgcagcgtcaagctacacc
gcagacctttcccacacgccgtcggcatcactgtccgagcagctgcgtttgggtcgtgag
gacacgacagcctctggaatcagtgtggagtgtaaggtctgtggggacaaggcgtcaggc
tttcactatggtgtacatgcctgtgagggttgtaagggctttttcagacgaactgtgcgc
atgaaattggaatatgagcgctgcgagcgttcctgcaaaattcagaagaagaatcgcaac
aagtgccaatattgtcgtttccagaagtgcctttctttgggaatgtctcatgatgcaatc
agatatggccgcatgcctgaggcagagaggaagaaattggtggcaggcctgcttgcagac
gagttaaacctctgcaaaccgggaggctcagacttgaagacactggccaagcaagtcaac
acagcctacttgaaaaatctcagtatgaccaagaagagggcccgcagtatcctgatggga
aagaccagcagcacctcaccattcgtgatctatgacgttgacacgctttggaaggctgaa
agtggtttagtgtggagccagttgcttccaggcgctcccctgaccaaggagatcggggtg
cacgtgttctaccgctgccagtgcaccacggtagagacggtgcgcgagctcaccgagttt
gccaagagcattccggggtttgtcgacctcttcctgaacgaccaggtgacgttgctgaag
tatggcgtgcatgaagcaatttttgcaatgttaccatcgctcatgaacaaagatggactt
ctggtggccaatggtaaaggctttgtgaccagggagttcttgcgcagcctaaggaaacct
ttcagtgagatcatggaacccaagtttgagtttgctgtcaagttcaatgccctggagctg
gacgacagtgacctggccctctttgtagctgccatcatcctctgtggagatcgcccaggc
ttgatgaatgtgaagcaggtggagcagagccaggacaacatcctgcaggccctagacctc
catctgcaggccaaccactctgactcagtctacctcttccccaagctgctgcagaaaatg
gccgacctccgtcagctggtcacggagaatgctcagcttgtgcagaaaatcaaaaaaact
gagtctgagacatcattgcaccctcttttgcaggagatctacaaggacatgtattaa
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