Syngnathus scovelli (Gulf pipefish): 125988926
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Entry
125988926 CDS
T08785
Symbol
mkrn4
Name
(RefSeq) makorin, ring finger protein, 4 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125988926 (mkrn4)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125988926 (mkrn4)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125988926 (mkrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
Torus
zf_CCCH_4
zf-RING_2
zf-CCCH_DUS3L
zf-CCCH_2
zf-C3HC4
zf-rbx1
zf-CCCH_PARP12
zf-UDP
zf-RING_UBOX
zf-CCCH_3
zf-C3HC4_4
zf-RING_5
zf-RING_11
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
125988926
NCBI-ProteinID:
XP_049610716
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All DBs
Position
2:22511898..22527667
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AA seq
378 aa
AA seq
DB search
MDRSRFGRYGGICRHFLNGSCRYGSRCHYSHELPAEPPSQICRFFQKGACWYGERCRYIH
IPQSEGGADVAGRRLAIPTVFSSTSSSSSSSSTSVAQGTADRQGSETFARMQADVSPRRQ
RGSSGSMVTSANVVYTGNRNTAKQLHDAHSRVPPKSSDQCDANMCDKEESLPSSTEAAGA
SASSCTDGTLEAFLQSRDITCGICMDKVYEKMDRRNQVFGILPNCSHAFCLQCIMTWRKT
RNLGPDIVKTCPQCRVRSAFYIPNKYWVEGQAKESLIADFKEKFSKRSCSYYARYEHCPF
ETECLYRHDRTARRTSFLCTTDDEDDDEDYDDDEDYDGLLNFFIAMTLLRADEDGDGDNV
DDDGDNFDIPFFLAEYGF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttcgcgtttcggccgctatggcggtatctgcaggcatttcttgaatggatcg
tgcagatatggctcaagatgccattattcacacgaattacccgctgaaccgccgtctcaa
atatgtcggttcttccagaaaggtgcatgctggtatggtgaacggtgcaggtatatccat
atcccccaatcagaaggtggtgcagatgttgcaggtcgaagactggctataccaacagtc
ttctcctccacatcctcttcctcctcttcttcctccacctccgtggcccaaggtacagct
gaccgacagggttctgagacctttgctcgtatgcaggctgatgtgtcgccaaggcgtcaa
cgtggctcatcggggtccatggtgacctctgcaaatgtcgtctacactgggaacagaaac
actgcgaagcaattacatgatgctcattcccgagtgccgcccaagagctcagatcagtgt
gacgcaaatatgtgtgacaaagaggaaagtcttcccagtagcacagaagccgcgggtgcc
tctgcgtcctcgtgtaccgacgggacgttggaggcattcctgcagagtcgggatatcacc
tgtggcatatgcatggacaaggtgtatgagaagatggaccgcagaaaccaggtgtttgga
atcctacccaactgcagtcatgctttctgcctgcagtgcatcatgacctggaggaaaacc
agaaacctcgggcctgatattgtcaagacctgcccacaatgcagggtgagatcggccttc
tatatacctaacaaatactgggtggaaggtcaagcaaaggaaagcctaatagcagacttc
aaagaaaaattcagtaagcgaagctgcagttattatgcacgatacgaacactgtcccttt
gaaacggagtgtctctatcggcatgacaggactgcacgccgcacatcattcttgtgtact
acagatgatgaagatgacgatgaagactacgatgatgacgaagactatgatggtctgctc
aatttctttatagccatgacgcttcttcgtgctgatgaggatggtgacggtgacaatgtt
gacgatgatggtgacaactttgacattccttttttcctagcggagtatggattctga
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