Syngnathus scovelli (Gulf pipefish): 125988935
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Entry
125988935 CDS
T08785
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03015
mRNA surveillance pathway
sscv04261
Adrenergic signaling in cardiomyocytes
sscv04382
Cornified envelope formation
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125988935
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125988935
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
125988935
09158 Development and regeneration
04382 Cornified envelope formation
125988935
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125988935
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125988935
03036 Chromosome and associated proteins [BR:
sscv03036
]
125988935
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125988935
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125988935
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125988935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Y_phosphatase2
DSE1_N
Motif
Other DBs
NCBI-GeneID:
125988935
NCBI-ProteinID:
XP_049610761
LinkDB
All DBs
Position
1:complement(12933158..12975180)
Genome browser
AA seq
453 aa
AA seq
DB search
MLSPIQVLCSDITTLSLEPEPFASYTEADIISTVEFNQTGELLATGDKGGRVVIFQREPE
SKTELFSQGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIK
LWKVSERDKRPEGYNLKDEEGRIKDISTVTSLQVPVLKPMDLMVEVSPRRVFANAHTYHV
NSISVNSDHETYMSADDLRINLWHLNITDRSFNIVDIKPANMEDLTEVITAAEFHPHHCN
LFVYSSSKGTLRLCDMREAALCDRHSKLFEEPEDPSARSFFSEIISSVSDVKFSHSGRYL
LTRDYLTAKVWDLNMESKPLETYQVHDYLRSKLCSLYENDCIFDKFECAWNGSDSVIMTG
AYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCAAGSKRRKDDISVDSLDFTKKI
LHTAWHPTENIIAIAATNNLYIFQDKLNSEMHS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttgagccccatccaggtgctgtgctccgacatcactaccctttctctggagcctgag
ccgtttgcctcttacactgaagccgacatcatatccactgttgagttcaaccaaacggga
gagctgctggccactggggacaagggaggcagagtggtcatctttcagcgagaacctgag
agcaaaactgagctgttctcccagggagagtacaacgtctacagcactttccagagccac
gagcccgagtttgactaccttaagagtctggagattgaggaaaagatcaataagatccga
tggctgcctcagcagaacgcggcacatttcctcctctccaccaatgataaaaccattaag
ctgtggaaggtgagtgaacgagacaaacgtccagaggggtacaacttgaaagatgaagag
ggtcggatcaaggacatttccactgtgacctccctacaggtgcctgttttgaagcccatg
gacttaatggtggaggtgagcccgaggcgggtgttcgccaacgcccacacctatcacgtc
aattccatctcggtcaactccgaccacgaaacctacatgtcggccgacgacctgaggata
aacctctggcatctgaacatcaccgatcgcagcttcaacattgtggacattaagccagcc
aacatggaagatctgacagaggtgatcacagcggctgagtttcacccccaccactgtaac
ctgtttgtgtacagcagcagcaaaggcaccctgcgcctctgtgacatgagggaggcggcg
ctgtgcgaccgacactccaaattgtttgaggagccagaggaccccagcgctcgttccttc
ttctccgagattatctcctctgtgtctgacgtcaagtttagccacagcgggcgctacctg
ctcaccagagactatctgactgccaaagtttgggacctcaacatggagagcaagcccttg
gagacctaccaggttcacgattacctccgcagcaagttgtgctccctttatgaaaatgac
tgcatcttcgacaaatttgagtgcgcctggaacggctcggacagcgtgatcatgacagga
gcctacaacaacttcttccgcatgttcgaccgcaacaccaagcgtgacgtgaccttagaa
gcgtcccgggagagcagcaaaccccgagccgtgctcaagccacgtagagtatgtgccgcc
gggagcaagcggcgcaaggatgacatcagcgtggacagcctggacttcaccaagaagatc
ctgcacacggcctggcatccgacagagaacatcattgccatcgccgccaccaacaacttg
tacatcttccaggacaaactcaactcggagatgcattcgtga
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