KEGG   Syngnathus scovelli (Gulf pipefish): 125988989
Entry
125988989         CDS       T08785                                 
Name
(RefSeq) protein snail homolog Sna-like
  KO
K05707  snail 1
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    125988989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sscv03000]
    125988989
Transcription factors [BR:sscv03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    125988989
SSDB
Motif
Pfam: zf-C2H2 zf-H2C2_2 zf-C2H2_4 C2CH-3rd_BIRD-IDD zf-C2H2_6 zf-C2HE zf-C2H2_jaz zf-met Zf-C2H2_ZNF451_1st Zf-C2H2_ZNF451_C Zf-C2H2_ZNF451_6th zf-C2H2_7th_ZNF462 Zn_ribbon_SprT zf-BED zf-C2H2_15 zf-C2H2_CASZ1 Teflon_C Zn_ribbon_Dof
Other DBs
NCBI-GeneID: 125988989
NCBI-ProteinID: XP_049610842
LinkDB
Position
2:complement(11459028..11461606)
AA seq 261 aa
MPRSFLVKKYFSSRKPCHWESLLDSQTAVVPESFPRAALPNQNHSSDLTCYPSVPFTPLP
APLSPIAPASLPPSPLGPLDLSSSPFSSSGEEDEDNGRSSDPPSPDVLQGVFHCMYCSNT
YSDLTALSCHQTSHLRVPPLAAEASASRPAFHCKHCPKEYTSLGALKMHIRSHTLPCVCT
TCGKAFSRPWLLRGHIRTHTGERPFACQHCNRAFADRSNLRAHLQTHSEVKKYQCGSCSR
TFSRMSLLHKHNASRCGNLAS
NT seq 786 nt   +upstreamnt  +downstreamnt
atgccccggtcattccttgtcaagaagtatttttcaagcaggaaaccatgccactgggaa
agcctgctggacagccaaactgctgttgtcccagaaagcttcccacgggctgcccttcca
aatcagaaccacagctctgacctcacctgctacccctcagttccattcacgccactgcca
gctcccctttccccgatcgccccggcatccctccctccgtcaccgctcgggccccttgac
ctcagcagctccccgtttagcagcagcggcgaggaagacgaagacaatggccgttcttcg
gatccccccagcccggatgtcctccaaggcgtcttccactgcatgtactgcagtaatacc
tacagcgacctcacggcactgtcctgccaccagacgtcccacctgcgcgtcccaccgctg
gccgccgaggcgtctgcgtcccggccggccttccattgcaaacactgccccaaggagtac
accagcctgggcgctctgaagatgcacatccgctcacacacgttgccgtgcgtgtgcact
acttgcggcaaggccttctcccgaccgtggctgctgaggggacacatccgcacgcacaca
ggtgagcgcccgtttgcttgtcaacactgtaaccgggcctttgccgaccgctccaacctc
cgggcgcacctgcagacgcactctgaagtgaagaagtaccagtgtggctcctgctctcgc
accttcagccgcatgtctctgctgcacaaacacaacgcctcccgatgcggcaacctggcc
tcatag

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