Syngnathus scovelli (Gulf pipefish): 125988992
Help
Entry
125988992 CDS
T08785
Symbol
cfap74
Name
(RefSeq) cilia- and flagella-associated protein 74 isoform X1
KO
K25607
cilia- and flagella-associated protein 74
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125988992 (cfap74)
Cilium and associated proteins [BR:
sscv03037
]
Motile cilia and associated proteins
Sperm associated proteins
125988992 (cfap74)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig-CFAP74_4th
Ig-CFAP74_3rd
Ig_CFAP74_1st
Ig-CFAP74_2
HYDIN_VesB_CFA65-like_Ig
Ig_CFAP65_4th
ASH
Cep192_D4
Cep192_D3
PapD-like
Cep192_D6
Cep192_D8
Ig_Dlec1_1
Motif
Other DBs
NCBI-GeneID:
125988992
NCBI-ProteinID:
XP_049610847
LinkDB
All DBs
Position
2:complement(17842397..17878656)
Genome browser
AA seq
1598 aa
AA seq
DB search
MDDFKDEEADGFPDLEWLKELENDSDDDLASEQGDFKQRTFSETARMFKLRRNLHQLDNF
QRQKECALLKAREDLSLLRQSIESLLEQRDVLEREIEHQEAAKNSVAVIRLRAQHKTLCY
KLQREEEIEAQTNNELRQQELELSEIELEVGKFSVLRKEVQEEERVFKVHKAQNAVKRLQ
QEMNNSHTLQLKIQHLKKKNADIMEKTVTLSQKENEDVQANRKVGAKYLRKTVLRMQQQE
AEREQKKRESMQKRIQAVKLLKSNIEATQENLRVRQSRAKANALKKERQEKRLKETLQAQ
GINSTRHIYQQKRDEEMKRKQEEFKERQTTRKVEIVDKLLEEQLVKNRKAQKAPLPKTKT
GHKILSPGKIREKLLRYLDSVHPSGTERETKLRNLSASGSSSDSDYQEDIIQKEMQHLSL
PDSLEEPEFCGLWDQNFKPPLNEKARLTPTDVKQEHAVVCPKVNTTPKKVGGKQIKGPSF
TSKPEVILFKDFEVGETYKKKVVLTNISYITNHCKFLGISAQLQDFIMINFQPPGPLSTG
MSCEMHITFHPSINEDLEGEVDFASAAGRFSVPVRCTIKRCDLEVDNQFIDFGSHVVGQI
ISRTITLTNKGALATRFSLDTTKPVPEIHQVQMPSHRSADTQQDTSTVSTTCADLSQTSG
SMITREVHSMEHVLTRSTVTQQSQRESRVSSPAPRAAPVSSSMLPQIPEGLSDACDIRIG
NVREGDIGPFESVKLEIIFSPTVPGEVKLDLYIKFSDPTSFPIAILVKGEGAGLPVWVVE
PNIDMKICMFDRLYQEVVTLQSSTSTALKLTFDLWPEMRKHMEIIPRTGFLQAQSSFTAH
LKFVPRNTLPQDAGKYFDSATGVLEVPMTVQVAGQVQPVIYTVQAIVTSSDLKFGQSEVD
FGYCSIYQSFKSSVHLTNMSLLPQEFGFVGLPEFVDVQPNDGFGTLLPQETLEIDIIFSA
SKAKEYRFHLSCKSGINRVFPLACRAMGVCPTLALSHSLVQFGPTAVGDQSTALLYLTYN
QTVPNQSKQRPSAGALLFSFTPPQDSSISITPAAGRLLPGKRCLVLVTFNPKLEDRNIKE
EALRLLRAKQTNEADIKKLLEEEAKREVEPSKGNKLSKSSKLSKFSAKTASPIYTSPTDS
IDAGGQRFEEARASLLHSFTSRYSEYTIPCFVSDGDPPEEDRQAQPTWSPLNTVYLKLQC
PAIQPPLVVVSSNIRNYALDFQQVAVGERVTKKFSVKNISAESLELRSSLLDIYGPFLLL
NALRGIGPGEQHTLVLAFCPTLEKKYCEILEVRCQKMTLAVTLRGEGVVPAITSSHPGGL
LDFDYVLEKESTSHVLKLQNSSAVAVGFKAMLYSLSPSKTQGADEGVALLLGGYTDSKIQ
PVVGTQNHNGLSVFSVLPVEGSIAARQSQDVVVTFHPDHPSVNYSDQLTIELVNKRKLCV
LDLKGAASSHNMYLCGGDPLTVPIESLLPPLITSQTQLEGQSEDTEIPVLVTLRASYSMG
TIRPAVRELEVGCIRATKKGSEFNWDNMASLQQKGFDVDPHKGNVEAGTRRTIKITWTPQ
SGHKPNEVVKMCAPLALKGDETSVYSVTLLALVSTHVD
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atggatgactttaaggatgaagaagcagatgggtttcctgatctggagtggttaaaagaa
ttagagaatgatagtgatgatgaccttgccagtgagcaaggcgatttcaagcagaggaca
ttttcagagacagcacggatgttcaagctgagacggaacctgcaccagctggacaacttc
cagagacagaaggagtgtgcgctcctgaaagccagagaagatctcagcctcttgcgtcag
agcattgagagtctattggagcagcgggatgtgttggaacgagaaatagaacatcaagaa
gcagcaaagaacagcgtggcagttattcgtttgcgggctcagcataagactctgtgttac
aagctgcaaagggaagaagaaattgaggcccaaaccaacaatgagctgaggcaacaagaa
ttagagctcagtgagattgagctggaggttggcaagttctccgtgttgcggaaggaggtg
caagaagaagagcgggtcttcaaggtccacaaagctcagaatgcagtcaaacggctacag
caggagatgaacaacagccataccctgcagctaaagattcaacatctcaaaaagaaaaat
gctgacatcatggagaaaacggtaactctgagccagaaggaaaatgaagatgtccaggca
aaccgcaaagtaggggccaagtacttgaggaaaactgtcttaagaatgcaacagcaagaa
gctgagagagagcagaagaagagagagtcaatgcaaaagagaatacaggctgtcaagtta
ctgaagtccaacattgaagcaacccaagaaaacctgcgggtcagacagagccgagccaaa
gcaaacgccttgaagaaagaacggcaagagaagcgtctgaaagaaacgctacaggcccaa
ggcatcaacagcaccaggcacatataccaacagaaacgagacgaggagatgaaacgaaag
caagaagaattcaaggagagacagacgacgaggaaagtcgagattgtggacaagcttctt
gaggagcagctggtgaagaatagaaaagcacaaaaggcacctttgccaaaaaccaaaaca
ggtcacaagatcctttccccaggcaagatacgcgagaagcttctgcgttacctggattcc
gtacacccatcaggcacagagagagagacaaaattaagaaacttgagtgctagcggctct
tcatcagattcggactaccaggaagatatcatccaaaaggaaatgcagcacctgagcctt
cccgacagcctggaggagcccgagttctgtgggctgtgggatcaaaacttcaagcccccc
ttgaatgagaaggcaaggctgacgccaacagatgtgaaacaagaacatgcagtggtctgc
ccaaaggtcaacacaactcccaaaaaagttggtggaaaacagataaaagggccttcattc
acgagtaagccagaagtcatcctattcaaggactttgaagtgggggaaacctataaaaag
aaagtagtcctgactaacatcagctatattactaatcactgcaagtttcttgggatctct
gctcaactacaggattttattatgatcaactttcaacctcctggtcctttatcgactggg
atgtcctgtgaaatgcacattactttccacccttcgatcaatgaagaccttgaaggagag
gttgactttgcctcagcagcaggtcgcttctctgtgcctgtcagatgcaccatcaagaga
tgtgatttggaggtcgacaaccagtttattgactttggttcacatgtagtgggccaaatt
atttcacggactatcactttgaccaacaagggcgccctcgcaacccgctttagcctggat
actacaaagcctgttccagaaattcaccaggtccagatgccatcccatcgctcggccgac
acacagcaggacacgtccacagtcagcacaacatgtgctgatctgagccagacttctgga
tccatgatcaccagggaagtgcacagtatggaacatgttttgaccaggtctactgtaacc
cagcaatctcaacgagaatcacgggtttcaagtccagctccaagagctgctcctgtgtct
tccagcatgctcccccagatcccggagggcctgtctgacgcctgtgacatacgtataggc
aacgtaagagaaggagatattggaccttttgaaagtgttaaactagagataatattctcc
ccgactgttcctggagaagtcaaattggacctctacatcaagttttcagatccaacaagc
ttcccaatcgccatcctggtgaagggtgagggagcaggcctcccagtgtgggtggtggag
ccgaatattgacatgaagatctgcatgtttgaccgcctttatcaagaggttgtcacactc
caaagcagcaccagcacagccttgaagcttacttttgacctgtggccggagatgaggaaa
cacatggagatcataccaaggacaggctttctccaggctcagtcaagcttcactgctcac
ctcaagtttgtgccaagaaacaccttaccccaagatgctggcaagtattttgacagtgcg
actggcgtattggaggttccaatgacagtgcaggttgctgggcaggtgcagcctgtcatt
tacacggtccaagccattgtgacttcgtccgacttgaagtttggccagagtgaggtggat
tttggctattgttctatctaccagtcattcaaaagcagtgtacacctgaccaacatgtca
cttctacctcaagagtttggttttgttggcctgccagagtttgttgacgttcaacctaat
gatggcttcggcacgcttctcccgcaagaaacactggagattgatatcatttttagcgct
agcaaagcaaaagagtaccgtttccatctgagctgcaaatcaggaatcaacagagttttt
cccctagcttgccgtgccatgggtgtctgccctacgttggcgctctcccactccctggtg
cagtttggacccacggcagttggcgaccagtccaccgctctcctttacctcacctataac
caaactgtcccaaaccagtctaaacaacgaccctctgctggggccttgctgttttccttc
accccacctcaagactcaagcatcagtatcactcctgctgcaggacgcctgctacctggc
aagaggtgtttggtcctggtcacatttaatcccaaacttgaagaccgcaatatcaaggaa
gaggctttgcgtctcctcagagccaagcagaccaatgaagcagacattaaaaaattactt
gaagaagaggctaaacgggaggtggagcccagcaaagggaataaactgtccaagagcagc
aaattatcaaaattttctgccaaaactgcaagcccaatatacacgtcaccgaccgacagc
atcgatgcaggaggtcagaggtttgaggaagctagggcatctctgctgcactccttcacc
tcacgctacagtgagtacaccatcccgtgttttgtgtcagatggtgaccctcccgaggag
gacaggcaagctcagccaacgtggagtcctctcaatacagtctacttaaagctccagtgc
cctgctatacagccccctctagtggtggtatccagcaatattagaaattatgccttggat
ttccagcaagtggcagtaggagagagagtgacgaaaaagttttcggtcaagaacatttcg
gcggaatctctagagttgaggtcatcattgctggatatatatggaccctttttacttctt
aacgctctcagagggataggacccggagagcaacacaccttggtgttggccttctgtcct
acgttggagaaaaagtactgtgagattttggaagtgcgttgtcagaagatgaccctggct
gtgactctgcgtggggagggcgtggtgccggccatcacctcctcccaccctggagggctc
ttggactttgattatgtgctggagaaggagagcacctcacatgtcctgaagctccagaac
agctcagctgttgcagtgggatttaaggcgatgttgtacagcctttcgccctccaagact
cagggtgctgatgaaggcgtggccctcctcttgggtggttacacggactccaagatccag
cctgttgtaggaacgcagaaccacaatgggcttagtgttttcagtgttctgccagtggaa
ggaagcattgccgcgagacaaagccaggacgttgtagtcacatttcaccctgatcaccct
tccgtcaactattctgatcaactcaccattgagcttgtcaataagagaaaattatgcgta
ctggatctgaaaggcgcagcgtcgtcccacaatatgtatctgtgtggaggagatccactg
acagttcctattgaatcccttcttccgccactaattaccagtcaaactcagctcgaagga
cagtcagaggacacggaaatccctgtactagtcaccctgcgggccagctacagcatgggg
accatcagacccgcagttagagagctggaagtaggctgcatacgggccactaagaagggg
agtgaatttaactgggacaacatggcatccctgcagcagaagggcttcgatgtggatccc
cacaaaggcaatgtagaggcaggcaccaggcgcaccatcaagatcacctggaccccacag
agtggacacaagcctaatgaagtggtgaagatgtgtgcgcctctcgcattaaaaggtgat
gaaacgagtgtgtacagcgtcactctcttggctttagtctccactcatgtggactga
DBGET
integrated database retrieval system
