Syngnathus scovelli (Gulf pipefish): 125989082
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Entry
125989082 CDS
T08785
Name
(RefSeq) DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sscv01001
]
125989082
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125989082
Enzymes [BR:
sscv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125989082
Protein kinases [BR:
sscv01001
]
Serine/threonine kinases: Other
Other
125989082
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125989082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
LisH
WD40
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
125989082
NCBI-ProteinID:
XP_049611027
LinkDB
All DBs
Position
2:complement(9367527..9378097)
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AA seq
1534 aa
AA seq
DB search
MASASASVDSKAELTALLEQWEREQQGSTQELVNILTKISELVEKETEEYHKADPDPFDD
RHPGRADPECSLGHLLKILFKNDDFMNTLVNSYVMTSREFALNAEACRLLQNIMPGLETA
VVFQEKEGIVEKLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLHRL
RELQDKDAETKREIKRPSPRKTPSVPLLPLDEETVDGGFEKRFSLGQNGAETEGPEPGED
GELNLSALEPENELPFHPSAPRKANNCATSGVKTMMKPISASGSPLHLGTSDGSSYLKRK
AEKESGRSAKHKSNFSLPEAERNISELSNSSWSEMSPWVIGNSYRLYPLTPEIEQRLILQ
YLTPLGEYQELLAVFMQMGARELLLHYIDLKQTNDVQLTFEALKYLASLLLHKKFAAEFV
AHGGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCMLPPSVLSDVVGYTLWLLECS
HASGCCHATMFFSISFAFRAVLELFDKQDGLRRLVNLISTLEILNPDDQGALLSDDDIFS
SRQTAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHSQPYYKAVSYSREQVVEMM
EFLIEHGPLRLYWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDTLSILTV
VPKTQMLLSETVAVVDESGSTISSAGMNIVLAVAEGEVLNDAEIQKSALQVVLNCVCAPD
KRMSSIGKFIAGTPRRRLPHMTKASENVLTKMWNVVQSNNGIKVLLSLLTVKMPITDADQ
IRALACKALVGLSRSTSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKFCKFAAELM
ERISGKPLLIGTDVSLAWLQRASVVAQSRITFPQKELLLLIRNHLVAKGLHDTAAALTKE
AELPMACVSHSPFVSVTPPNAPIASLPRTPRLTNGVGSRLASHPSHSSTPSAGHLQARPS
TSQPAAAALPSTPHCGNSSPLIGRIVFSRERHAWCGASGCKKPRVLRQKSDHGAFSQTPA
MKKQFDRHMPSPPALDGIITEYLREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQAPLN
FTSRHTRRVIYPKYGGVDGGCFDRHLIFSRFRPISVFREADEDQSGFTCCAFSARERFLM
LGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLILTSASWNYPTSALWGMKSV
FIMKHSFLGDHYVEFSKLSQDRVIGTEEHLAHIYDTQTCQVTLTLNNPDLANNYKRNCAT
FNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLH
TVPALDQCNTVFNNNGTVIYGAILQADDEDDMMEMQMKSPFGSSVRTFNATDYKPIATID
VKKNIFDLCTDSKDCYLAVIENQDSINTDTVCRLYEVGRQRLAEEQEEEEEDQEDDDQEE
DDDDDDDSDDDVDTDRLIAELENENGGDDDDDGNDEFSPSDDEVARLLEEDLDAGDDDDD
NDDDSDNDDAELDVDNDSSDNSDLEDDIILSLNE
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagcatctgccagtgtggactccaaggcagagctgactgctctactggaacaa
tgggagagggaacagcaaggcagcacacaggagctagttaacatcctcaccaaaatctcc
gagcttgttgagaaggagactgaagagtaccataaagcagacccagacccctttgatgac
cgacatcctgggagagctgatccagaatgttcattagggcatttactcaagatcctgttt
aagaatgatgacttcatgaacacattggtgaatagttatgtgatgaccagcagagaattt
gccctcaatgcagaagcttgtcgtctgcttcagaacatcatgcctggcctggagacagcg
gtggtttttcaggaaaaggagggaattgttgaaaaattgttcaagtgggctcaggaagca
gagcagccgctcagaatctatgccacaggcttgttggcaggtgccatggagaaccaggac
atagcagccaactaccgagaagagaactctgttttggtgcctttgatgctccatcgctta
cgtgagcttcaagataaagatgcggagacaaaaagagaaatcaaacgtcccagtcccagg
aaaactccaagtgtacctttgctgcctttggatgaggagactgtcgatggaggctttgag
aagcgcttctcgctcggccaaaacggggctgaaacggaaggaccggaaccaggagaggat
ggcgaattgaatctttccgccttggagccggagaacgagcttccgtttcatcccagcgcc
cctcgcaaggccaacaactgcgccacctcgggcgttaaaacaatgatgaagcccatatca
gcctccgggtcacctctgcatctaggcacctctgatgggagtagttacctcaaaagaaaa
gcagagaaagaaagcggcaggtccgcaaagcacaagtccaatttctccttgccagaagca
gaaaggaatataagcgagctttccaacagcagctggtctgagatgagcccttgggtgatt
ggcaacagttaccgtttatacccgctgacgccagagatcgagcagagactcattttgcaa
tatctcactcctctgggagaatatcaggagctgttggccgtgtttatgcaaatgggtgcc
cgtgagctgctgttgcattatattgatctaaagcagaccaacgatgtgcagctcacattt
gaggcgctcaagtacttggcttctcttctgcttcacaagaagtttgctgcagagtttgtg
gcgcacggaggagttcagaagttgctggaaatcccaaggccttctatggctgccactgga
gtgtccctgtgcctctactaccttgcctataaccaggatgccatggaaagggtgtgtatg
ctgcccccctcggtcctgtcagatgtggttggctacacactgtggctgctggaatgctcg
catgcatcgggctgttgccacgccaccatgttcttctccatttcctttgctttccgcgcc
gtgctggagctcttcgacaaacaggacggcttgcgacgtctcgtcaatctgattagcaca
ttggaaatcctaaaccctgatgaccagggggcgttgctgagtgacgacgacattttctcc
agcaggcagacagcaaagcacacatgcatggcgctgcgcaggtactttgaggctcatctg
gccatcaaggtggagcaggtgaagcagtccctgcagcgcacagaaggaggcgctccaatt
cattcgcagccctactacaaggcggtcagttacagccgcgagcaggtcgtggaaatgatg
gaattcctcatcgagcacggccctcttcgtttatattgggaaccagcggaggtcttccac
aaactctcttgtgtccaactcctcctgcaactcatttccatcgcatgtgactggaggacc
tactatggcaggagcgacactgtgcgttatgcacttgacaccctgagtattctcactgtt
gtaccaaagactcaaatgctgctgtccgagactgtcgctgtcgtcgatgagagcgggtct
actatttctagcgcaggaatgaacattgtcctggcagtggcagagggagaagtgttgaac
gatgccgagatccagaagtctgccctgcaggttgtccttaactgcgtgtgcgctcccgac
aaacgcatgtccagcatcgggaagtttatcgcgggcactccgcgtcgtcgccttcctcac
atgaccaaagccagcgagaatgtgctcacaaagatgtggaatgtagtgcagtccaacaat
ggcattaaggtgctgctgtccctgctgacggtgaagatgcctattacggatgcggatcag
atccgagctctagcctgcaaggccttggtcggtctgtctcgctctacttctgtcaggcaa
atcatcagcaagctgcctctgttcagcagcgggcacatccagcagctcatgaaggagccc
gtgctccaggacaaacgcagcgagcacgtcaagttctgcaagttcgcggcggagctcatg
gaaagaatatccgggaaaccgttgctgatcggcaccgacgtatccttggcgtggctgcag
agagccagcgtggtggcccagtccagaatcaccttcccgcagaaagagctgctgctgctc
attaggaaccacttggtagccaaaggccttcacgacacagccgctgccctcaccaaggag
gccgagctcccgatggcgtgcgtgtctcattcgccttttgtctccgtcactcccccgaac
gcccccatcgccagcctacctcgcaccccgcggctgaccaatggcgtcggctcgagactc
gccagccacccgtctcattcatccaccccgtcggccggccatttacaggcgcgcccctcc
acatcgcaacccgccgcggccgccttgccgtcgacgccacactgcggcaacagctcccct
ctgatcggccgcatcgttttctcccgcgagcggcacgcgtggtgcggcgcgagcggctgc
aagaaacctcgagtgctgaggcagaagtccgatcacggcgccttcagccagacgccggcg
atgaagaagcagtttgacaggcacatgccctctccccccgctttggacggcatcatcaca
gagtatctacgggaacagcacgcgcgctgtaaaaacccagtggccacctgcccgcccttt
tctctcttcacccctcatcagtgccctgagcccaaacagagacggcaggcacctctcaac
tttacgtcgcgacacacgaggagggtcatatatcccaaatacggaggagtggatggagga
tgctttgacagacacctcatcttcagcaggttccgtccaatttccgttttccgggaagct
gatgaagatcagagtggcttcacttgttgtgccttctcagcccgtgaacgcttcctgatg
cttggaacttgcacgggacaattgaaactctacaatgtgttcacgggccaggaggaggcc
agctacagctgtcacagttcagccatcactcacctcgagccctctcgggacggctcctta
attttaacatctgcctcctggaattacccaacgtctgcactgtgggggatgaagtcggtg
ttcataatgaaacattcgtttctgggtgaccattatgtggagttcagcaagctgtcacaa
gatcgtgtcattgggactgaggagcatctagcgcatatttatgacacccagacatgccaa
gtgaccctgactctaaacaaccctgacctggcgaataactacaagaggaactgtgccacc
ttcaaccccacagatgacctggtactcaacgacggcgtgctgtgggatgtgcgctcggct
caggccatccacaagtttgacaagttcaacatgaacatcagtggcgtgttccaccccaat
ggcctcgaggtcatcattaacacggaaatatgggatctgcgaaccttccacctgcttcac
acagttcctgctctggaccagtgcaacacggtcttcaacaacaatggcaccgttatttat
ggagcaatattacaggctgacgatgaggacgacatgatggagatgcagatgaaaagtcct
tttggttcatccgtccggactttcaacgccacagactacaaacccatcgccaccattgat
gtcaagaagaatatctttgatctgtgcacagactcgaaagactgctaccttgctgtgatc
gaaaaccaagactccattaacacggacacagtctgccggctttatgaagttggccgacaa
agactggcagaggaacaggaggaggaagaggaggatcaggaggatgacgatcaggaggaa
gacgacgacgatgatgacgactccgatgacgacgtcgatacggatcgccttatcgcagag
cttgagaacgaaaatggcggagatgatgatgacgacgggaatgatgagttctctccctcc
gatgacgaagtggctcgcctcctcgaggaggacttggatgcaggggacgacgacgacgat
aatgatgacgactcggacaatgatgatgcggagctggatgtggacaatgacagctccgac
aactccgaccttgaggatgacatcattctgtccttgaatgagtga
DBGET
integrated database retrieval system
