Syngnathus scovelli (Gulf pipefish): 125989173
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Entry
125989173 CDS
T08785
Symbol
taf11
Name
(RefSeq) transcription initiation factor TFIID subunit 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125989173 (taf11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125989173 (taf11)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125989173 (taf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
GMT-wHTH
Cytomega_UL84
Motif
Other DBs
NCBI-GeneID:
125989173
NCBI-ProteinID:
XP_049611208
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All DBs
Position
2:complement(11643699..11645543)
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AA seq
207 aa
AA seq
DB search
MADPARIKTEGTLENPAAGQDEKPNAKVTEDTPSPAPEKTTDEPKESSPQDQHKQDDANE
PAAAEDEEEGTSGQPSSKRLKVESEKKKEKRQKVDEDEIQKMQVLVSSFSEDQLNRYEMY
RRSAFPKAAIKRLIQSITGSSVSQNVVIAMSGISKVFAGEIVEEALDVCEKWGDTPPLQP
KHMREAVRRLKSRNQIPNTKFKNILFH
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctgcgcggatcaaaactgagggcacacttgagaacccagcagctggccaa
gatgagaagcctaacgccaaggtcaccgaggacacaccgtctcctgcacctgaaaagact
acagacgaaccaaaggagtcttccccacaagaccagcacaaacaggatgatgcaaatgaa
ccggcagcagcagaggatgaagaagaagggacttcgggtcagccttcgtcgaaaagactg
aaggtggaatcagaaaagaaaaaggagaagcggcaaaaggttgatgaggatgaaatacaa
aagatgcaggttttggtgtcatctttctctgaagaccaactgaatcgttatgaaatgtac
aggcgttctgctttccctaaggctgctattaagaggctgatccagtccatcacgggatcc
tcagtgtcccagaacgtggtcattgccatgtctggtatctccaaagtctttgctggggaa
atagttgaggaagcattggatgtttgtgagaagtggggagacacgccacctcttcagccc
aaacacatgagggaggcagtgaggaggctcaagagccgcaatcagattcccaacactaag
ttcaaaaacattctgtttcactga
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integrated database retrieval system
