Syngnathus scovelli (Gulf pipefish): 125989334
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Entry
125989334 CDS
T08785
Symbol
hoxc12a
Name
(RefSeq) homeobox protein Hox-C12a
KO
K09297
homeobox protein HoxC/D12
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125989334 (hoxc12a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
125989334 (hoxc12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Homez
Motif
Other DBs
NCBI-GeneID:
125989334
NCBI-ProteinID:
XP_049611528
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Position
2:complement(2837887..2843563)
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AA seq
304 aa
AA seq
DB search
MGEHNLLNPGFVGPLVNIHTGDTFYFPNFRASGGQLAGLPSLSYPRRDNVCSLPWNPSEP
CNGYSQSYFSSPVSINPSFNRSCEISRAEEAKCYYGNGAREACGGGGGGGGGGGGGGSSG
SGGLKREDRARDASSSSLTSEHGMHAGIGATTASGASVSAAAVAAAAFAKYEYGNEQLTQ
DPPSCQSMESDSSSSLLNESSKPPSSDTQSLVSPGSHANNIAAGGGAPWYPMHTRTRKKR
KPYSKLQLAELEGEFMLNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLMLREQA
LAYF
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagcataatctccttaatccagggtttgtgggacctttggtaaacatccacact
ggagacaccttttatttccccaattttcgagcctcggggggacaactggcggggctgcct
tctctctcctacccgaggagggacaacgtttgctccctcccgtggaatccttcggagccg
tgcaatggatactcccagtcctacttcagcagccccgtttctattaacccctcgttcaac
cgctcgtgcgagatcagcagagcggaggaggccaagtgttactacggcaacggggccagg
gaggcgtgcggcggcggcggcggtggtggcggcggtggcggcggcggcggaagctcgggc
tcgggtggcctcaagcgagaggacagggcgagggacgcatcctcctcatccctgacatcc
gagcacgggatgcacgccggtatcggcgccaccaccgcctccggcgcttccgtctcggcc
gcggcggtggcggcggccgccttcgccaagtacgagtacggtaacgagcagttgacgcag
gatcctccgtcctgccagtccatggagtccgactccagctcgtccctgctgaacgagagc
agcaagcccccatccagcgacacgcagagccttgtgtccccgggaagccacgccaacaac
atcgccgcgggcggaggtgccccgtggtacccgatgcacacgcggaccaggaagaagcgc
aaaccgtattccaaacttcaactggctgaactggagggcgagttcatgctcaacgagttc
atcaccagacagcggcggagggagctctccgaccggctcaaccttagcgatcagcaggtg
aagatttggttccagaaccgcaggatgaagaagaagagactcatgctgagggaacaagct
ctggcctacttttag
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