Syngnathus scovelli (Gulf pipefish): 125989360
Help
Entry
125989360 CDS
T08785
Symbol
samd11
Name
(RefSeq) sterile alpha motif domain-containing protein 11 isoform X1
KO
K27582
sterile alpha motif domain-containing protein 11
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125989360 (samd11)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
125989360 (samd11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAND
SAM_1
SAM_2
IL34
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
125989360
NCBI-ProteinID:
XP_049611581
LinkDB
All DBs
Position
2:complement(17425303..17471437)
Genome browser
AA seq
899 aa
AA seq
DB search
MPAIKKERLDGDDMALAAFNQSEYLAPLNAAAIPVVTPHPPPYEHILAHHRAYLGLHDST
LHHQHLQHATDDLMLERFSSIPDFQPFFDNGEPCIEVECGENKALLYINKLCQGSKGPSI
KYRGEWLTPNEFQFVSGRETAKDWKRSIRHKGKSLKTLMSKGILQVHPPICDCPGCRISS
PVNRGRLAEKRTIPLPPNRVPKKELASIFSSDDSEGSERASGDHGHIKQEDELHYSIVRK
SRDSDLSTIISNLHHSRQHGMPEGQSASDHNASTGHTDDLLSKRRSFSPNSSSNSPSDSK
KSRSVSPKESAQSPEGEAGGSHSHMSPEEHYRRMMSALSEHGSYEEQQQRLYQLASSMGL
PGHDVLRAQQEALAAAVRNPAALEAHLPTGGSSSSSSQRRKQGLPQHRDAHYTDRELSQP
PPLLSPATAPHIALGPHLRAPFLGLPSALCQAPGYSFLQPAQAEIFVRQQEILRKQNLAR
LEMSAELLRQKELESLHQRQQLLSSDPLAVLPAGLPSDHPALRSLQDIPEGHPLREELAR
SSNAMLLLRHGATAPLLSANQQEQPKMSSTHKDAQAQSSTTGSDADNSRKALRRGPQTEL
RVGHRKRRREDKGSEGDEDMKDSDSETETCDERRGGDSVKSRSKHKDRGSRERDGKGARD
GTKDSHESSGRLNAPCSSAGSDSPSHHLFTSALGKSDVKLQLPPGFVPPLPTLQGQSLPF
GFPYINPYFHMGSVGGLFMDGEDSLPANPMEDLSKWSVEDVCGFISSLAGCAEYAQVFRE
QVIDGETLALLTEEHLLGIMALKLGPALRIRSQVARRIGRLFYMTGFPLAFPFPPSASLR
PSERDGEPPGVPADTLSLPLTLLQRPASTSESSSPYRGPTPGCSSPKQEKANGSTAVGR
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccatcaagaaggagcgcctggacggcgacgacatggctctggccgcctttaac
cagtccgaatacttggcccctttaaatgccgccgcgatccccgtggtgaccccgcacccg
ccgccttacgagcacattttggcccaccaccgcgcgtatttggggctccacgactcgacg
ctgcatcaccagcacctccagcacgccacggacgacttgatgctggagaggttctcctcc
atcccggacttccagcccttctttgacaacggcgagccgtgcatcgaggtggagtgcggg
gaaaacaaggctttgctttacattaacaaactatgtcaaggcagcaaaggaccctccatt
aaatataggggcgagtggcttactcccaacgagttccagtttgtcagtggccgggagaca
gccaaagactggaagcggagtattcgacacaaagggaaaagtctcaagacactcatgtct
aaaggaatcttacaggtgcatcctccaatctgtgattgtccaggttgtcgaatctcctct
cccgtgaatcgtgggcgcctggctgagaagcgcaccatcccgctgccccccaaccgtgtg
cccaagaaggagctggcctccatcttcagcagtgacgacagcgaagggagtgagcgggcc
agtggggatcacggccacatcaagcaggaggacgagcttcattacagtatagtgcgcaag
agtcgggacagtgacctctctacaatcatctccaacctgcaccacagcagacagcatggc
atgcccgagggccagtcagcctctgaccacaatgccagcacaggacacacagatgacctt
ctaagcaagaggagaagcttctctcccaacagcagcagcaactctccctcagacagtaag
aagtcacgcagcgtatcccccaaagagagcgcacagagcccggagggggaggcaggtggc
agccacagccacatgagccccgaagagcactacaggcgcatgatgtcagcgctcagcgag
catggatcctacgaggagcagcagcaacgcctctaccagctggccagcagcatgggactg
cccggacatgacgtgctgcgcgcacagcaggaagcattggctgcggcggtgaggaatcca
gcggccttagaagctcacctgcccacgggaggcagctcctcgtcatccagccagagacgc
aagcagggcctaccgcagcaccgagatgcacattacacagacagggaactgtcccaacct
ccacccctcctatcacctgcgacagcccctcacatcgcgttaggacctcacttgcgggct
cctttccttggcttgccctcagctctctgccaggcccccggttacagtttcctgcaaccg
gctcaagctgaaatttttgtgcggcagcaggagatactgaggaagcagaatctagccaga
cttgagatgtcagccgagttactgagacagaaggagttggagagtcttcaccagcgacag
caactgctgagctccgacccgcttgccgttctccccgccggcctgccctcggaccacccg
gccctgcggagccttcaagacatcccagagggtcatccgctccgagaggaactggcccgc
agctccaatgccatgctgttgcttcgacacggggcgacggcgcccctgctaagcgccaac
cagcaggagcagcccaagatgtcgtccacccacaaagacgcccaagcgcagagctccacc
actggttcggacgctgataattccaggaaggccctccgccggggccctcagactgagctc
cgcgttggccatcgtaaaagaagaagagaggacaaaggaagcgagggagacgaggacatg
aaggactcggacagcgaaacagaaacgtgtgacgagaggcggggaggcgacagtgttaag
tcgaggagtaaacacaaggacagagggagtagagaaagagacggcaagggggcgcgtgac
ggcaccaaggacagccatgaaagctcaggccggctcaacgcaccttgtagttcagctggc
agcgactcgcccagtcaccacctgttcacctcagcgctgggaaagtcggatgtcaagctc
cagcttccgcctggatttgtgccacctctgcctactcttcaaggacagtcattgcccttc
ggattcccctacatcaacccttactttcacatgggctctgtgggaggtcttttcatggat
ggggaggactcgcttccagccaaccccatggaggacttaagcaagtggagtgtggaggac
gtatgtggcttcataagcagtctggccggatgtgctgaatacgctcaggttttccgggag
caggtcattgatggggagacattagctctgctcactgaggagcatctgcttggcatcatg
gcactaaagttgggccctgccctcaggattcgctcgcaggtggcacggcgcatcggcaga
cttttctacatgaccggattccctctggcgttcccctttccgccctcagccagcttgcgc
ccctcggagcgggatggggagcccccgggtgtacccgccgacactctctccttgcccctt
accctgcttcagagacccgcctccacgagtgaaagctcttctccttaccgcgggcccacg
ccgggctgctcttcacccaagcaggagaaggccaacggctctacagcggtgggaagataa
DBGET
integrated database retrieval system
