Syngnathus scovelli (Gulf pipefish): 125989369
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Entry
125989369 CDS
T08785
Symbol
arfgef2
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125989369 (arfgef2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125989369 (arfgef2)
Membrane trafficking [BR:
sscv04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
125989369 (arfgef2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
125989369
NCBI-ProteinID:
XP_049611641
LinkDB
All DBs
Position
2:complement(15209428..15224300)
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AA seq
1811 aa
AA seq
DB search
MQQHQQHQQQQHLQAENSKTKSMFLSRALEKILSDREVKRSQHSQLRKACQVALDEIKAE
LEKQKDGTVVPPKVNYIEADQYVLPFELACQSKSPRIVSTSLDCLQKLIAYGHITGNAPD
GRIPGKRLIDRLVETICNCFQGPQTDEGVQLQIIKALLTAVTSPHIEIHEGTILLTVRTC
YNIYLASRNLINQTTAKATLTQMLNVIFTRMENQAALEAQEQEKERLRLPQDNPSPVPCT
QRSGSPRSDRTPTPEPHSSPSPAASTPDLNAINSTPPPPPDLDLDTPTVNGESERNSVFE
DEGTEVPQGEVVQADGEGPVTQTEGDEGEQSHHTDDPVTQPASEQTQVALPKADVEALQM
NGIIEDRSSVSSADMLDAEALQGSHSPSRFSHILQKDAFLVFRSLCKLSMKPLAEGPPDP
KSHELRSKIVSLQLLLSVLQGAGPLFRTHEMFVNAIKQYLCVALSKNGVSSVPEVFELSL
AIFLTLLSHFKVHLKMQIEVFFREIFLTILETSTSSFEHKWMVIQTLTRICADAQCVVDI
YVNYDCDLNASNIFERLVNDLSKIAMGRSGQELGMTPLQELSLRKKGLECLVSILKCMVE
WSKDMYVNPNLQANLGQDPPSESEMSELKLPEQLAGRRDSVSSLDSTVSAGVSLSQLDHP
EQYEVIKQQKDIIEHGIELFNKKPKRGIQYLQDQGMLGSTAENIAQFLHQEDRLDTTQVG
EFLGENIKLNKEVMYCYVDQLDFCGRDFVSALRAFLEGFRLPGEAQKIDRLMEKFAARYL
ECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEY
LSSIYDEIAGKKIAMKESREFSITPKSTKQSVASEKQRRLLYNMEMEQMAKTAKALMEAV
SHAQAPFFSATHLEHVRPMFKLAWTPLLAAFSVGLQDCDDPEVASLCLEGIRCAIRIACI
FSMQLERDAYVQALARFTLLTASSSITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILR
CISQLELAQLIGTGVKTRYISGVVREKEASIKGLPSGTEEFMPLGLVAGHLVGNQDKRQM
AHLQESVGETSSQSVVVAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELASAHQPRMFSL
QKIVEISYYNMNRIRLQWSRIWQVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGE
LANFRFQKDFLRPFEHIMKKNRSPTIRDMVIRCVAQMVNSQAANIRSGWKNIFSVFHQAA
SDRDESIVDLAFQTSGHIVMNTFREHFAAAIDSFQDAVKCLSEFVCNAAFPDTSMEAIRL
IRHCAKYVSERPQALREYTSDDMNVAPGDRVWVRGWFPILFELSCIINRCKLDVRTRGLT
VMFEIMKSYGHTFEKHWWHDLFRIVFRIFDNMKLPEQQTEKTEWMTTTCNHALYAICDVF
TQFYEPLSEVLLADIFTQLQWCVRQDNEQLARSGTNCLENLVILNGEKFSPEVWNITCSC
MLEIFQNTSPQVLLTWRPAGQEDDAADGKHLDVDFDTQSQSSYDRALSERAHSQMSSDDT
WKGKSNARVSDHKLFAGLLIKCVVQLELIQTIDNIVFYPSTSKKEDAENMAAAQRDALEE
ASTDVGGSDCDQGMYSRMTSAHLFKLLDCLLESHTFAKDFNSNNEQRTALWRAGFKGKSK
PNLLKQETSSLACSLRILFRMYSDPQLRDAWPDIQTRLLLVCSEALAYFIGLTSESHREA
WNSLLMLLLTRTLRLPDDKFKPHASCYFSHLCEMMQFDLIPELRAVLRRFFLRIGAVFHI
AALGPRQRDGP
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcaccaacaacaccagcagcagcaacatctacaggcagagaatagtaaaacc
aaaagtatgtttctgtctcgggcgctggagaagatcctctcagatcgcgaggtgaagagg
agtcaacacagccagctgcgcaaagcctgtcaggtggcactggatgaaatcaaggcagag
ctcgagaaacaaaaggatggcacggtggtcccacccaaagtcaactacattgaggccgac
caatacgtgctgccatttgagttggcttgtcagtccaagtccccccggatagttagcacc
tctttggactgtctgcagaaactaatagcttatggacacatcacgggcaatgcgccggac
ggcagaatcccgggaaaaaggttgattgaccgcttggtggagaccatctgcaactgcttc
cagggaccacagactgacgagggagtccagctacagatcatcaaagcccttctgacagca
gtgacctccccacacatcgaaatccatgaaggcacaattctcctcactgtcaggacctgc
tacaacatctacctggccagccgcaacctcatcaaccagaccaccgccaaggccacgctc
actcagatgctcaacgtcatcttcacgcgcatggaaaaccaagctgctttggaagcccaa
gagcaagagaaagagcggcttcgactgccgcaagacaacccctctccggtcccttgtacc
cagagatctggctcgccccggtccgaccgcactcccacgccagagccacatagctcccca
tcaccggcagccagtactccagatctcaacgccatcaactcaacaccgccacctccaccc
gacctggacctagatacaccaactgttaatggagagtcagagagaaattcagtttttgaa
gatgaaggcaccgaagtgcctcagggcgaagtagttcaggcagatggagagggtccagta
acacagactgaaggagatgaaggggaacagtcgcatcacactgatgaccccgttacccag
cccgcctctgagcagacgcaagtagctctccctaaagccgacgtcgaagccctacagatg
aacggcatcattgaagaccgctcgtctgtttcttcagcggacatgctggatgctgaagcg
ttgcagggatcccacagcccctcgcgtttctctcatatcctacagaaggatgctttcctg
gtgtttcgctcactgtgcaaactttcaatgaagccacttgctgaaggacctccggatcca
aagtcgcacgagttgcgctccaagattgtgtcgctgcagctgctgctctcagtgctgcag
ggcgcggggccgttgttccgcacccacgagatgttcgtcaacgccatcaagcagtatctt
tgcgtggcgctctccaaaaacggcgtctcctccgtgcccgaggtcttcgagctgtcactg
gctatcttcctcacattgctgtcccattttaaggtccacctgaaaatgcagattgaggtg
ttttttagggagatttttctgaccattttggagacgtcgacgagttcgtttgagcacaag
tggatggttattcagacactgacacgcatttgcgcagatgctcaatgtgttgttgacatt
tacgtgaactacgactgtgatctcaatgcctccaatatctttgaacgcctggtcaacgat
ctgtccaaaatagctatgggcaggagtggtcaggagctgggcatgacccctctgcaggag
ctcagcctgcgtaagaagggcctggaatgcttggtgtccatcctcaaatgtatggttgag
tggagcaaggatatgtatgtcaacccaaacctgcaggccaacctcggccaggatcctcca
tcggagagcgaaatgtcagagttgaagcttccggagcagctggcaggacgtcgagacagc
gtcagctccttggactccacggtctcggccggtgtatcgctgtctcagctggaccacccg
gagcagtatgaagtcatcaaacagcagaaggacatcatcgagcatggcattgaactcttt
aacaaaaagccaaaacggggtatccagtatctgcaggatcagggcatgttgggctccaca
gctgagaacattgcacagttccttcaccaggaggacagactggacacaacccaagtgggc
gagttcctgggtgagaacataaagctgaataaagaggtgatgtactgctacgttgaccag
ctggacttctgtgggcgggactttgtctcggccctcagagcctttttggaaggattccgg
ctgccaggggaagcccaaaagattgataggctcatggagaagttcgctgcccgatacctc
gagtgcaaccagggacaaacattgtttgccagtgcagacacagcttatgtactggcttac
tccatcattatgctcaccacagacctgcatagtcctcaggtgaagaacaaaatgactaaa
gagcagtacatcaagatgaaccgtggcattaacgacagtaaggatcttcccgaagagtat
ttatcctctatttatgacgagattgccggaaagaagatagccatgaaggagagcagagag
ttctcaattactcccaagtccaccaagcagagtgtagccagtgaaaaacagcgtcgcctg
ttgtacaacatggagatggagcagatggccaagaccgctaaagctctgatggaggcagtc
agccatgcgcaggcccctttttttagcgctacacacctggaacacgtccggcccatgttt
aagctggcatggacccctttgctggcagcattcagcgtgggccttcaggactgtgatgac
ccggaggtcgcatcattgtgtctggagggcatccgatgcgccatcagaatcgcctgcatc
ttcagcatgcagctggaacgagatgcctacgtccaggccctggccaggttcacgctgctg
acagccagctccagcatcactgagatgaagcagaagaacattgacaccatcaagactctt
atcactgtggcacacacggatggaaactacctgggcaactcctggcacgagatcctgagg
tgtattagtcaactggaacttgctcagttgattggcactggggtgaagacacgctacata
tcaggggtggttcgagagaaagaggccagcatcaagggcttaccctcgggcacagaggaa
ttcatgccccttggactcgttgcaggtcatctggttggaaaccaggacaagcgtcagatg
gctcacctccaggagtcagtgggagagaccagctctcagagtgttgtcgtagcggtggac
aggatcttcacaggttctaccagactggatggaaacgcgattgtggactttgtgaggtgg
ctgtgcgccgtctccatggacgagctggcctcagcacatcagcctagaatgttcagtttg
cagaagatagtggagatttcctactacaacatgaaccgaatcaggctgcagtggtctcga
atctggcaggtcataggagaccattttaataaggttggctgtaatcccaatgaagatgta
gcgatatttgcagtggactcactcaggcagctctcaatgaagttcttggaaaaaggagag
ctcgcgaatttccgtttccaaaaagatttcctcaggccttttgagcacatcatgaagaaa
aacaggtctcctactatcagagacatggtgatcagatgcgtggcacagatggtcaactcc
caggctgccaacatccgttcgggctggaagaacatcttctcggtatttcaccaggcagcc
tccgaccgtgacgagtccatcgtggaccttgcattccagaccagtggccatatcgtcatg
aatacattccgggaacattttgcggctgcaatcgattccttccaagacgcggtgaagtgc
ctgtccgagtttgtgtgcaacgcagctttccccgacacgagcatggaggccatccgactc
atccgccactgcgccaaatatgtctcagagaggccacaggctcttagggagtacaccagc
gatgacatgaacgtggcccccggggatcgggtttgggttcgcggctggtttcccatcctg
tttgagctgtcttgcatcatcaatcgctgcaagttggatgtgcgcaccagaggtcttaca
gttatgtttgagatcatgaagagttatggccacaccttcgagaaacattggtggcacgac
ctcttccgaatcgtcttccgcatctttgacaacatgaagctcccggagcaacagaccgag
aaaacagagtggatgacgacgacgtgcaaccatgcgctgtacgccatctgtgacgtgttt
acacagttttacgagcctctcagcgaggtcctgctggcggacattttcacgcaactccaa
tggtgtgttcggcaagacaatgagcagctggctcgttcgggaaccaactgcctggagaac
ctggtgattctcaacggggagaagttcagtcctgaagtgtggaacatcacctgctcatgc
atgctggagatctttcaaaacaccagccctcaagtcttgttgacatggcgacctgctgga
caggaggatgacgctgctgacggcaagcacttggatgtagactttgacacccagtcccag
agcagctatgatcgagcgctttcggaaagagcacacagccaaatgtccagtgatgacacc
tggaagggcaagtccaatgctcgagtttcagaccacaagttgtttgcaggtctgctcatc
aaatgtgtggtgcagttggagcttatccagaccattgacaacattgtcttctacccgtcg
accagcaagaaagaggacgccgagaacatggctgctgcccagcgagacgctctggaagaa
gcgtcgaccgacgtcggcggttcggattgtgatcagggaatgtacagtcgtatgacctcc
gctcacctcttcaagctgctagactgtctgctggagtcgcacacctttgccaaggacttc
aactccaacaacgagcaaaggacggccctctggagggcaggcttcaaaggaaagtccaag
cccaacttgttgaagcaggaaactagcagccttgcctgcagcctgaggattctcttccga
atgtactcggacccccagctgcgtgacgcgtggcctgacatccaaacacgactgctactg
gtgtgcagtgaagctctggcctacttcatcggtctcacgtcggagagtcacagagaggca
tggaacagtctgctcatgctgctcctcaccaggacactcaggctgcctgatgacaagttc
aagccgcacgcctcgtgctacttctcgcacctgtgcgagatgatgcagtttgacctgatt
cccgagctacgcgccgttctgcggcgcttcttcctgcgcatcggtgccgtcttccacatt
gccgctctggggccacggcagagagatggcccctga
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