Syngnathus scovelli (Gulf pipefish): 125989475
Help
Entry
125989475 CDS
T08785
Symbol
pou6f1
Name
(RefSeq) POU domain, class 6, transcription factor 1 isoform X1
KO
K09368
POU domain transcription factor, class 6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125989475 (pou6f1)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
125989475 (pou6f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
125989475
NCBI-ProteinID:
XP_049611858
LinkDB
All DBs
Position
2:14686041..14694501
Genome browser
AA seq
615 aa
AA seq
DB search
MKSQDLPVRDALLAVNEQVIVMPGHETIRVLEVGVDAALSSSVPEGKTSEGKTEGGGAQP
EGSRPRNDNAGPQNTEEVVAGKQQASSGEAPAHAVHTLGPTVPISVSLPQPPMATVPVTV
QGCPQVLSQENLATLMTGMLAQTGSLGQPVLIPISMAGSIGGQGGLAVLTLPTTNVATLS
GLAAAAATQPANLLKMPFAGLQAATVLNSVQAPLQTSTQAVFQAPAGSIQQTCGLTSQST
PATIISAAQEAAAQATPAATVAQSNISVAALQTAGLSINPALINAASLGAQTQFLSSLTS
SPIMSNIAGITSQILTTTQGQVIGTLPFLVNPASLAGGAATPTLPFQGLQVQTVTPQLLL
NTQGQIFAAVGNGAAAVAASAAVLPKAAVSPAPSKPTSQVPATAATQLPVVIAPQPSVLK
SSTSPSSSLPITCGEMAKVGQLVSKPHQAASNEEGINLEEIREFAKNFKIRRLSLGLTQT
QVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLAEAEHWNQKGQQNLMEF
VGGEPSKKRKRRTSFTPQAIEVLNSYFEKNSLPTGQEITEIAKELNYDREVVRVWFCNRR
QTLKNTSKINIFQVQ
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctcaggaccttcctgtcagagatgccctgcttgctgtcaacgagcaggtcatc
gtgatgcctggccacgagacaattcgtgtgttagaagtcggggttgatgcggctctgtct
tcatcggtacctgaagggaagacaagtgagggcaaaacagaggggggaggggctcaacct
gagggttcccgcccacgcaatgacaatgctggaccccagaacactgaggaagtcgtagct
ggcaaacagcaagcgtcatcaggagaagctccagctcacgctgtccataccctcggtcca
actgtgcccatcagtgtatccttgccgcagcctcccatggccaccgtgcccgtcactgtg
caaggttgtccgcaggttctatcacaagaaaatctggccactctgatgactggcatgttg
gcccagacaggctcgctgggccagcccgtgctcatccccatcagcatggccggctccatc
ggcggccagggcggtctggctgttctcaccctgcccactaccaatgtggccacactgtct
ggactcgccgctgctgccgccacgcaacccgctaacctccttaagatgccctttgctggc
cttcaagctgcgacagttctaaattcagttcaggctcctctacaaaccagcacgcaggca
gtgttccaggctccggcaggttccatccagcaaacttgcggcttgacgtctcagtccaca
ccagctacgatcatttctgccgcccaagaagcagctgctcaagccacaccagccgctacc
gtggcccagtccaacatatcggtggctgcgctgcagacggctggactctccatcaatccc
gcactgatcaatgctgcatctttgggagcacagacccagtttctcagttccctcacctcc
agtcccatcatgtccaacatagcgggcatcacaagccagatcctaacaaccacacagggc
caggttataggaactcttccttttttggtgaacccggcctccctggccgggggggctgcc
actccgaccctccccttccagggtctgcaggtccagacggtcaccccgcagttactgctg
aacacccagggtcagatttttgctgcggtcgggaacggagctgccgcggttgcggcttct
gccgctgttctgcccaaagctgcagtgtcacctgcaccttccaaaccaacctcacaggtg
ccggcaacagctgccacgcagttgccggttgtcatcgccccgcagccgtcggtactcaaa
agctccacctcgccatcctcatcgctccccatcacctgcggcgagatggctaaagtgggc
cagcttgtcagcaagccccatcaggctgccagcaatgaggaaggcatcaatctggaagaa
attcgtgagtttgctaagaatttcaaaatccggcggctatccttgggattgacgcagact
caagtgggacaggcactgactgccacagagggcccggcctacagccaatccgccatttgc
aggtttgaaaagctggacatcaccccgaagagtgcccagaagttgaagccagtgttggag
aagtggcttgccgaggccgagcactggaaccaaaaaggtcagcagaacctgatggagttt
gtcggcggcgaaccatcgaagaaacgcaagcggcgcaccagtttcacgcctcaagccatc
gaagtcctcaactcctacttcgagaagaattcgctgcccacagggcaagagatcacggaa
atcgcgaaggagctaaactacgaccgagaggtggtgcgtgtttggttctgcaaccgacga
cagacgctgaaaaacaccagcaaaattaacattttccaggtccagtag
DBGET
integrated database retrieval system
