Syngnathus scovelli (Gulf pipefish): 125989484
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Entry
125989484 CDS
T08785
Symbol
ythdf1
Name
(RefSeq) YTH domain-containing family protein 1
KO
K20102
YTH domain-containing family protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125989484 (ythdf1)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125989484 (ythdf1)
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Gene cluster
GFIT
Motif
Pfam:
YTH
Cbm74
Motif
Other DBs
NCBI-GeneID:
125989484
NCBI-ProteinID:
XP_049611876
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All DBs
Position
2:8528664..8534413
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AA seq
601 aa
AA seq
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MMSAASIDPQISKGQDASKGFPVSVQNGSLHQKDTVHDNDFEPYLTGQSNQNNSYQSMTD
PYLSSYYAPSIGFPYPLSEAPWSTGGDPPIPYLTPYAPLSNGDHHFMHDTVFGQPGGLSS
SIYPHRFNFFPENPAFSAWGTSGSQGQQTQSSAYGGSYSYPPSSLGGTLVPDGQTGFHSD
TLSKAPGMNNLEQGMLSLKIGGDVTAGGSGVKTAGSVIGGGGVAVAAGNGGTVGMPPPKP
TSWAAIASKPAKLQQQKTKNKLSAPIGGGPLPPAPVKHNMVDIDTWDNKVSVTKMAAPLQ
HHHHHHHQQQHQPQPLHSHPGSLLPPLQQSLQSAQSLVQQMTMPGPPPPPMQSYQNHNSA
PAPQTRWVAPRNRNLCYGGGSLDSSGSSSGGVGNGCGGGGCGGPEPGSESHPVLEKLRAA
HSYNPKDFEWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDLAFRTMNSKGPV
YLLFSVNGSGHFCGVAEMRSPVDYGTSAGVWAQDKWKGKFDVNWLFVKDVPNSQLRHIRL
ENNDNKPVTNSRDTQEVPLEKAKQVLKIIATYKHTTSIFDDFSHYERKQEEEEVVKKDRQ
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgccgccagcattgacccgcagatctcgaaaggacaagatgccagcaaaggc
tttccagtgtcagtgcagaacggttctctgcaccagaaggacacggtccacgataatgac
tttgagccctatctcactggccaatccaaccagaataacagctatcaatccatgaccgac
ccttacttgtccagctactatgccccctccattgggttcccctaccccctcagtgaggct
ccgtggtccacaggtggtgacccacctatcccctacctgacgccttatgcgcccctcagc
aacggggaccaccacttcatgcacgatacggtatttggccagccagggggactcagcagc
agcatttatccgcacaggtttaactttttcccagagaacccggccttctccgcctggggc
accagcggttctcagggccagcagacccagagctcagcctacgggggaagttacagctac
ccgcccagctccttgggaggcactttagtcccagatggccagacggggttccatagcgac
accctcagtaaggccccgggtatgaacaacctggagcagggtatgctgagccttaaaatc
ggcggggatgtgacggccgggggctcgggcgtgaagacggccggctcggtgattggcggc
ggcggtgttgccgtcgccgcgggcaacgggggcacggtgggcatgccgcccccaaaacct
acgtcgtgggccgccatcgcgagtaaacccgccaaattgcagcaacaaaagaccaaaaac
aaactcagcgcgcccatcggtggcggcccgctccccccggcgccggtcaaacacaacatg
gtggacattgacacgtgggataataaagtttccgtcacaaagatggccgctcctttgcag
caccatcaccaccaccaccaccaacagcagcaccagccgcagccgcttcattctcacccc
ggcagcctcctaccccccctgcagcagtcgctccagtcggcccagtctctggtccagcaa
atgaccatgccgggtcccccgcctcccccgatgcagtcctaccagaaccacaactcggct
ccggcgccacagacccgctgggtggcccctcgcaatcgcaacttatgctatggcggcggg
agcttggacagcagcggttcgtccagcggcggggtcggtaatggctgcggcggcggcggc
tgcgggggacccgaaccgggctccgaatcacacccggtgctggagaagctgcgcgcggcc
cacagttacaacccgaaggattttgagtggaacctgaaaaatggccgcgtgttcatcatc
aagagctactcggaagacgacatccatcgctctatcaagtactccatctggtgcagcacg
gagcacggcaacaaacgcttggacttggccttcaggaccatgaactctaaaggtcctgtg
tatttgttgttcagcgtcaacggcagcggccatttctgcggcgtggcggaaatgcgctcg
cccgtggactacggcaccagcgccggcgtttgggcgcaggacaagtggaagggcaagttt
gacgtgaactggttgtttgttaaagacgtgcccaatagccagttgcgccacatccgcctg
gagaacaacgacaacaagccggtcaccaactctcgcgacactcaagaggtccctctggag
aaggccaagcaggtgctcaagatcattgccacctacaaacacaccacctccatctttgat
gacttttcccactatgagaggaagcaggaggaggaggaagtggtgaaaaaggatcgtcag
aagtaa
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