Syngnathus scovelli (Gulf pipefish): 125989490
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Entry
125989490 CDS
T08785
Symbol
agap1
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125989490 (agap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125989490 (agap1)
Membrane trafficking [BR:
sscv04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
125989490 (agap1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank_2
Ank
Ank_5
Ank_4
Roc
PH_6
PH_4
Motif
Other DBs
NCBI-GeneID:
125989490
NCBI-ProteinID:
XP_049611887
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All DBs
Position
2:2386937..2427930
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AA seq
1190 aa
AA seq
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MFLLDGNCTEGMERGTAQRKTVYRISLTLVKKETLEDGQDASDKPKVGKVRAFRHQASLE
APRSGLLEQVEEVEDESDDLSSQSSMRNFRTYSTGQLELGRLKLARKQQLQMTKKKNAAS
MSWQESPPRLEENICARTDSPGNVVSSGVMKMKKLFKSKSLEKSPESLDHGGTTPHLNGT
SPPNGTPETPPQREPAGLLRRSFSFRHWTGSERPRLQALMKDKQQNSSARTDLEPASPKV
TQDGEFQSPAARPRLGTMEKSRTLEVGAILNKTDPVFDLSCWESAHGGKNRTLDNSDLQV
LAAHKDGAALRRGGRSGERRLLRFFSGIFSRRDGTGTWTPVGSPGAVRSLRHRTTPLQSS
TESVNGSPGDAFVNSQEWTLSRSVPELKVGIVGNLASGKSALVHRYLTGTYVQEESPEAD
VDAGGRFKKEMVVDGQSHLLLIRDEGGPPEAQFALWVDAVIFVFSLEDEISFQTVYHYFS
RLANYRNAADLPLVLVGTQDAISSSNPRVIDDSRARRLSNDLKRCTYYETCATYGLNVER
VFQDVAQKIVASRKKQQLSIGPCKSLPNSPSHSSICTTQVPNVPVNQVSETSNGGGSLSD
YSSSVPSTPSTSQKELRIDVPQSTNTPTPVRKQSKRRSNLFTSRKTSETDKDKKGLEARA
DSIGSGRAIPIKQGMLLKRSGKSLNKEWKKKYVTLCDNGLLTYHPSLHDYMQNVHGKEID
LLRTTVKVPGKRPPRAVSTCAVMPSPKTNGLTKDMSSLQLGHIPGSVSSSSSVSQMASGV
SLMSFNSRGSDGMGGHQRSYSVSSADQWTDAGVIANSGIGTDGALGDCMSSSPSISSTTS
PKMEPPPSPHANRKKHRRKKSTSNFKADGLAGTAEEQEENFEFTIVSLTGQTWHFEATSY
EERDAWVQVIEGQILASLQSCESSKNKSRLTSQTEAMALQSIRSIRGNSRCADCDSQNPD
WASLNLGALICIECSGIHRNLGTHLSRVRSLDLDEWPLELIKVMSAIGNEFANSVWEANS
QGHLKPGPDASREERERWIRAKYERRMFLASLPCAELSLGQQLLRATVEEDVRAVVLLLA
HGSRQQVNETCGEGDGRNALHLGSHKGNVVITQLLIWYGVDLMARDAHGNSALAYARQAN
SQECVDTLAQYGCPDERYPLMATPNLSRRNANRNNSCSSTGSAAGSSAFI
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcctggatgggaactgtactgaagggatggagagagggacggctcagaggaag
acagtgtaccgcatctccctcacgctggtgaagaaggagacattggaggatggacaagat
gcgtcggacaagccaaaagtggggaaggtgagggccttcaggcaccaagcttcactggag
gccccgcgcagtggcctgctagaacaagtggaagaagtggaggatgaatctgacgatttg
tcatcgcaaagcagcatgaggaacttcaggacgtatagcaccggccagctggagctgggg
aggcttaaactggctcgcaagcagcagcttcaaatgacaaagaaaaaaaacgccgcgtcc
atgagttggcaggaatctccacccagacttgaggagaacatttgtgctaggacagactct
cctgggaatgtggtgagtagcggcgtgatgaagatgaagaaactcttcaagtcaaagagt
ttggagaagagccctgagtcattagaccacggcgggacgacgccacacctaaacggaacg
tcacctccaaacgggacacccgagacgccacctcagcgggaacccgctggcctgctgcgc
cgcagcttcagcttccgacactggacaggcagcgagcggccacgtttgcaagcgctaatg
aaggacaaacagcaaaacagttctgctcgcacagatctggaaccggcaagcccgaaggtc
acccaagatggcgagttccagagccccgccgcccgccctcgcctgggcaccatggaaaaa
agccgaacgctggaagtcggtgccatcctgaacaagacggaccccgtgtttgacctcagc
tgctgggagagcgcgcacggcgggaagaatcgcacgctggacaacagtgacctccaggtt
ctggccgcgcacaaagacggggcggcgcttcggagaggaggacgttccggtgagaggagg
ctgctacgcttcttcagcggcatcttctcccgcagggacgggaccggtacctggacgccg
gtggggagccccggcgccgtccgttccctccggcacagaaccactcctctgcaatccagc
acggagagtgtgaatggaagcccaggcgatgctttcgtgaacagccaggagtggactctc
agtcgctctgtgccggaactcaaagtgggcattgtgggtaacctggccagcgggaagtcg
gcgttggtccacagatacctgacaggaacgtacgtccaggaggagtcacccgaagctgac
gtggatgcaggtggacggtttaagaaggagatggtggttgatgggcagagtcatctgctg
ctcatcagggatgaaggaggcccaccggaggcacagttcgctctgtgggttgatgcagtc
atctttgtcttcagtctggaggatgagatcagcttccaaaccgtttatcattacttcagc
cgtcttgccaactacaggaacgctgccgacctgcccctggtcttagttggcacgcaagac
gccatcagctcgtccaacccgagggtgattgacgacagccgggcccgaagactgtccaac
gacctgaagcgctgcacctactacgaaacgtgcgccacctacggcctcaacgtggagcga
gtcttccaggacgttgctcagaagatcgtggcctctcggaagaagcagcagctgtccata
ggcccgtgcaaatcgctcccaaactcgccgagtcactcgtccatctgcaccacgcaggtg
cccaacgtaccggtcaaccaggtcagtgagacaagtaacggcggcggcagtttgagcgac
tactcgtcgtcggtgccgtccacgccgagcaccagccagaaggagctgcgcatcgacgtt
ccgcagagcaccaatacgcccacgcccgtccgcaagcagtccaagcgtcgctccaacctc
ttcacctcgaggaagaccagcgagacggacaaggataaaaaagggctggaggctcgcgcc
gacagcatcggcagcgggcgagccatccccatcaaacagggtatgctgctgaagaggagc
ggcaagtccctcaacaaggagtggaagaaaaagtatgtgacgctgtgcgacaatgggctg
ctcacctaccaccccagtctccacgactatatgcagaacgtccacgggaaagagattgac
ctactcaggaccacggtgaaggtgccgggtaaacggccgccgcgagccgtgtccacctgc
gccgtcatgcccagccccaaaaccaacgggctgaccaaggacatgagcagcctgcaactg
ggacacattccaggttcggttagcagcagctcgtcggtctctcagatggcgagcggcgta
agcttgatgtccttcaacagccgaggctcggacggcatgggcgggcaccagcgctcgtat
tccgtctccagcgccgaccagtggaccgacgccggcgtcatcgccaactcgggaatcggc
acggacggggctttgggcgactgcatgtcttccagtcccagcatctccagtacaaccagt
cccaagatggagccgccgccatcgccgcacgccaaccgcaaaaagcaccggcggaagaaa
agcaccagcaacttcaaagcggacggcctcgccggtaccgccgaagagcaagaggagaac
tttgagttcaccatcgtatcacttacgggtcaaacgtggcatttcgaagccacttcgtac
gaggagcgagacgcctgggtgcaggtcatcgagggtcagatcctggccagtcttcagtcc
tgtgagagcagcaaaaacaagtctcgtctgaccagccagacggaggccatggcgctgcag
tccatccgaagtattcgtggaaatagccgctgtgccgactgcgactctcaaaacccagac
tgggccagcctcaacctcggtgccctgatatgcatcgagtgctcgggcatccacaggaac
ctgggcacccacctgtcccgggtacgctcgctggacctcgacgagtggccgctggaactc
atcaaggtcatgtcggccatcggcaacgagtttgccaacagcgtgtgggaggccaactcg
cagggtcacctgaagcctggaccggacgccagcagggaagaacgcgaacgctggatccgg
gccaagtacgagcggcgtatgtttttggcctcgctgccgtgcgccgagctgtcgctgggc
cagcagcttttgcgagcgacggtggaggaggacgtgcgcgccgtcgtgctgctgctggcg
cacggctccaggcagcaagtcaacgagacgtgcggcgagggggacggacgcaacgcgctg
cacctgggcagccacaaaggcaacgtggtcatcacgcagcttctcatctggtacggtgtg
gatctgatggcgagggacgcccacggcaacagcgccctggcgtacgcccgacaagccaac
agccaggagtgcgtggacacgctagcccagtacggctgcccggatgaacgctacccgctc
atggccacgcccaacttgtctcgccgcaacgccaaccgcaacaacagctgcagcagcacg
ggcagcgccgccggcagcagcgccttcatctga
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