Syngnathus scovelli (Gulf pipefish): 125989591
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Entry
125989591 CDS
T08785
Symbol
rnf103
Name
(RefSeq) E3 ubiquitin-protein ligase RNF103 isoform X1
KO
K15695
E3 ubiquitin-protein ligase RNF103 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125989591 (rnf103)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125989591 (rnf103)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125989591 (rnf103)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
125989591
NCBI-ProteinID:
XP_049611950
LinkDB
All DBs
Position
1:complement(19813518..19819203)
Genome browser
AA seq
685 aa
AA seq
DB search
MWLKLFFLLLYFIILFTLARIFEAVVWYETGVFATQLVDPVSLSYKKLKTILECRGLGYS
GLAEKKDVSQLVEKSGELTHGELYSAIKKENEQTEAGDASSTHFSGEMHFYELVEDTKDG
IWLVQILVSMQVIAQDRDALLSKSNWRKMVQKVSQFGIRTGTFNCSHDYRSCVRRGWQRS
TLVMSVPQTSASKGKVMLKEYNGRRIEPEHIFRWMTSQMSHRIKTLCRWEKLQEEWRPDP
LHPLKMFLFAPLPQPPVFFSSLSVKFTGRIEFIFVDVRHWDNDSSLLEIGVTQSPAYILK
MPEGIYHYGNSTGEFLSVAAMDTFLRSVQPEVNDLFVLSLVLINLLAWMDLFITQGATVK
RFVVLIRTLGTYNSILLVSWLPFLALLQLSYLDALYGYSLKLLRYADTTTLASVVRADWT
FYSSHPALFLSTYLAHGLLVDYFEKKRRCGIRSQEDSSTNLEWLASLWEWYTSYLLHPIA
SLQQVPSDWEDDPNFLFERLAFPDLWLRPLVSMDYIKALPAWKFRCGGTDVPEKETDCCY
SDTDSRGSSDCAPPSSQQQESAQDSSTHCLDSNVECTCTAEASMRRCCQGNLDAPSVERV
SRHERCDLSGWPRDVLRCSECVVCLENFVSGELLMGLPCGHAFHQHCIVMWLDAGRHCCP
VCRWPSYKKKQQHPSHVHGSPSWDT
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaagttgttctttttgctcctgtatttcatcattttgtttacgttagctcgg
atattcgaggctgtagtttggtatgagactggtgtgttcgcgacacaactggtcgacccg
gtttcgctcagttataagaagctgaagaccatcctggagtgtcgtgggctggggtactct
ggattggctgagaagaaagatgtcagccagctggtggagaaatcaggcgagctgacacac
ggggagttatattcagccataaagaaggagaatgagcaaaccgaggcaggtgatgccagc
agcacacattttagtggagagatgcacttctatgagttggtggaggacactaaagatggc
atctggttggttcagatcttggtgtctatgcaggtcattgcacaggacagagacgctctg
cttagtaagtccaactggcggaagatggtacagaaagtctcccagtttggaatccgaact
ggaacattcaactgctctcatgactacaggtcgtgtgtgagacgcggctggcaacgttcc
actctggtcatgtcagtcccgcagacgtcagcgtcgaagggcaaagtcatgctgaaagaa
tacaacggccgtcgcatcgaacccgaacacatcttccgttggatgacctcccagatgtct
caccgcatcaagacattgtgtcgttgggagaagctgcaggaggagtggcgccccgacccg
ctccacccgttaaagatgtttctgttcgctcccctgcctcagccgcctgttttcttctcc
tcgctctctgttaagttcaccggtaggattgagttcatttttgtggatgtaaggcactgg
gacaatgacagcagcctattagagattggcgtaacgcagagccccgcctacatcctgaag
atgccagagggcatctatcactatggcaacagtactggtgaatttttgtctgtagcggcc
atggacacgttcctgcgatcagtccaaccagaagtcaatgacctttttgtactcagtctt
gtcctgatcaaccttttggcatggatggatctcttcattacacagggagcaacagtgaaa
cggtttgttgttttaatccgaacgcttgggacctacaattccatcctgttggtgtcctgg
cttccatttctggccctccttcaactgtcctacctggacgctctgtatggttacagtctg
aagttgcttcgctacgctgacacaaccactctggcaagcgtggtgagagccgactggacc
ttctattcgtctcacccggctctcttcctatctacctacctggcccacggtctgctggtc
gattattttgagaaaaaacgtcgctgtggcatcagaagccaggaggacagcagcaccaac
ttggagtggctggccagtttgtgggagtggtacacatcgtacctgcttcaccccatcgca
tcgctacaacaagtgccatcagactgggaggatgaccccaatttcctttttgagcgtttg
gctttccccgatctctggcttcgcccattagtgagcatggactacattaaagctttaccc
gcatggaagttccgatgtggcggcacagacgtgccggaaaaggagactgattgttgttac
tcagatacggacagccgtgggtcaagtgactgtgcgccaccaagcagccaacagcaggag
agcgcacaggatagcagcacgcactgtctcgacagtaacgtggagtgcacgtgtactgct
gaggcctcgatgcgccgctgttgccaaggcaacttggatgccccatcagttgagagagtt
tctcggcacgagcgctgtgacctgtcagggtggccccgtgacgttttgcggtgctccgag
tgtgtcgtttgcctggagaactttgtgagtggagaacttctaatgggtcttccctgtggc
cacgccttccaccagcactgcattgtgatgtggttagatgcggggcgacactgctgccct
gtgtgccgctggcccagctacaagaagaaacagcagcacccgtcgcatgtgcacggtagt
cctagttgggacacttaa
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