Syngnathus scovelli (Gulf pipefish): 125989747
Help
Entry
125989747 CDS
T08785
Symbol
emilin1a
Name
(RefSeq) EMILIN-1-A
KO
K24246
emilin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125989747 (emilin1a)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
125989747 (emilin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
Collagen
Filament
Dynamitin
Baculo_PEP_C
Apolipoprotein
IFT57
DUF1664
Sec10_N
Spectrin
Laminin_II
DUF1351
DUF6402
COG6_N
Motif
Other DBs
NCBI-GeneID:
125989747
NCBI-ProteinID:
XP_049611976
LinkDB
All DBs
Position
20:7509828..7528241
Genome browser
AA seq
1025 aa
AA seq
DB search
METLFYMIALALARTSWGLGYAEPGVLSGQRAASRHRNWCAYVVTRTVSCVMEDGVETYI
KPDYQRCTWGQCPRVAYRTYRRPRYKVAYKMVTEMEWKCCHGYSGEDCHEGPGNGGRPHV
TQTGHTQGGGQSGNGDSEKVKQLEGTINGFSRDLHNLQTSINDLNKKFSVLNGAIVPADS
AQPHMKETINNINTKLDHLYNRTQVHDQTLLNINHHLENGGGNDLDGTAVGGGLRGNQLN
TLKEQILTELERRVTLSCSACQAGVEDLKKQQEQDRERIRSLEKLINSMNQQFRQNLQIV
KSEAEQSQTCCSTVTQLEKRLTDLDVHVTSTSSKCDTIKGRLDKELSGSVGGKGKVTEDR
MNVRLRELEKRVNNTVRKTEQRCTNTNNNLKDSVQRDVTQLRNMVLTQLDDHSFKIGKLE
LDVAVLGDTVTDHSRRLSQIENVTTFLDRSLTETKKMCNDTCGRNGKDHKTEDTVKTLEW
RVVANQGEIQKFNTRLNDLSVSGDSLADKIINLTDDVKKIIAVTGKDGANFNKIVTQVET
LSQDWEDCFVCSSVEEDLRLLANSTKTGLNTCQTELNDLRRKVDSGETMCSQVCSNLQEE
VGRLRDEVEKSSEQCQININDVRNRLDGHTDHNGRLGGDLKSIQGELSKVMDTFHSINDT
LKNMDTSIRMHGYTLDDLTDTNDRIDSEVDNLKNILAKHEDDSSIRFGNFGKDIEVIRSN
YVTEVGECRRASDGLEHRLAKLEGLCGRFDSFSDSLQRIKEGLNQHVSGLWSCVNGLNVT
VTSQGHVIDNIQNVQLEKVHSKIHRLNSSLLDLAKEFHDFIRQDFMGPPGLPGPKGERGQ
PGPQGVVGPQGKVGSQGEQGKQGPVGPPGLRGEQGLAGSDAHVPRLSFSVALTRPMRGVG
TIVFNEIFVNEKNVYNPRTGYFTAPVRGRYFFSGILTGHKNVKIEAVLSKSNTGVARVDS
AGYQPEGLEKPMAEAKHIPGALAVFNIILPMEAGDTVCIDLVTGKLAYSSEPLTIFSGML
LYENI
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggagacgttgttttacatgatcgcgctcgctttggcacggacgtcttggggtcttgga
tacgcggagcccggggtccttagtggccagagggcggcgagtagacacaggaactggtgt
gcttatgtggtgacccgcactgttagctgtgtgatggaggacggcgtggagacatatatc
aaaccagactaccaacgctgtacctggggccagtgtcctcgagtggcgtaccggacatac
aggaggccaaggtacaaggtggcttataaaatggtgacagaaatggagtggaaatgttgc
catggatactcgggggaggactgtcacgaggggccaggcaacggcgggcgacctcatgtc
acacagacaggccacacacaaggcggcggacagagtggaaatggtgacagtgaaaaagtc
aaacagctggaaggaacaatcaatggctttagcagagaccttcacaacctacagacctcc
attaatgatctaaacaagaaattttcagttctaaacggagcgattgtgccagccgattct
gcccaaccgcacatgaaggaaacgatcaacaacatcaacacgaagctggaccatctgtat
aataggacacaggtccatgatcagaccctgcttaacatcaaccaccacttagagaacgga
gggggaaacgacctggatggaactgccgtcggaggaggacttcgggggaaccagctgaac
acactcaaggaacaaatcctgacagagctggagagaagggtgactctgtcctgctctgcc
tgccaggctggtgtagaagatctgaaaaagcagcaagaacaagacagagaaagaattcga
tccctggagaagttgatcaattccatgaaccaacaattccgacagaaccttcaaattgtt
aaaagtgaggctgaacagtcccagacgtgctgcagcacggtcactcagctggagaagaga
ttgacagatctagatgtccacgtcacctccacttccagcaagtgcgacaccattaaaggg
cgactggataaggagttgtctggaagtgtaggaggaaagggaaaggtgacagaagacagg
atgaatgtcagactgagagagttagagaagagggtgaacaacaccgtgagaaaaacagaa
caaaggtgtactaacaccaataataatctaaaggacagtgtccaaagagatgtcacgcag
ctccggaacatggtcctaactcagctggatgatcatagcttcaaaatcgggaaactagag
cttgatgtggccgttcttggagacaccgtaactgaccacagtcggcgtttaagccagatc
gagaatgtcacaacattcctggacagaagtttaacagaaacgaaaaaaatgtgcaatgac
acttgtgggcgcaacggaaaagatcataaaactgaagacactgtaaaaaccttagaatgg
agagttgtggctaaccaaggggaaatccagaaattcaacaccagattaaatgatttgtct
gtgtcaggtgactcactggcagacaagattattaatctaacagatgatgtcaaaaagatc
attgccgtgacaggcaaggatggtgcgaacttcaacaagatagtcacgcaagttgaaaca
ctcagccaggattgggaagactgttttgtttgcagcagcgtggaagaagatttacgttta
ctggccaactccaccaaaacgggcctcaacacatgtcagacagaactgaacgatctacgc
aggaaagtggattcgggagaaacgatgtgctctcaggtgtgctcaaacctccaagaagaa
gtagggcgactcagagatgaagtggagaagagcagtgaacagtgtcaaatcaacatcaat
gatgtgaggaatcgcttagacggtcacactgaccacaatggaagattaggaggggatctg
aagtccatccaaggggagctatctaaggtcatggacacattccactccattaatgacacc
ctgaagaacatggatacgagcatacggatgcatgggtacacgctagatgatctgacggac
actaacgacaggatcgattcagaggtggacaatttgaagaatattctggccaagcatgag
gatgactcaagcattcgattcggcaactttggaaaagacatcgaagtgatcaggagtaac
tatgtgacggaagtcggggagtgtcgacgggcaagcgacggcctagaacaccgtcttgcc
aaacttgaaggactatgcggacgcttcgattctttttcggatagtttgcagaggattaag
gagggcttgaaccaacatgtgtctggattgtggagctgtgtcaatggacttaatgtaaca
gtcacatctcaaggacatgtaattgacaatatccagaatgtccagctcgagaaggtccac
tccaaaatccacaggttgaactcatctctgctagatctggctaaggagtttcatgatttc
atacgacaggatttcatgggtccacctggtctaccgggccccaaaggtgagcgagggcag
cctggaccccagggagttgtgggaccccaaggaaaggtggggtctcagggtgaacagggc
aaacaaggaccagttggacccccaggtctcagaggtgaacagggtcttgcagggtctgat
gcccatgtaccacgactttcgttctccgtggcgctcaccaggccgatgagaggtgtcgga
accatcgtgttcaacgaaatatttgtcaatgaaaagaacgtctataaccccagaacaggt
tatttcacagctccagtgagagggaggtactttttcagtggaatcctaaccggccataag
aatgtgaagattgaggcagtattgtccaaatccaacactggtgtggctcgagtagactca
gcaggatatcagcctgaaggccttgaaaagccaatggcggaagcaaaacacatccctgga
gctctggcagtttttaacatcatcctgcctatggaggcgggggatacggtctgtatcgac
ctggtcacaggcaagctggcatactcatcagaacctttgaccatcttcagtgggatgtta
ctctatgagaacatctga
DBGET
integrated database retrieval system
