Syngnathus scovelli (Gulf pipefish): 125989766
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Entry
125989766 CDS
T08785
Symbol
psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
125989766 (psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sscv03051
]
125989766 (psmc6)
Proteasome [BR:
sscv03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
125989766 (psmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_16
AAA_5
AAA_22
AAA_2
PRS7_OB
RuvB_N
AAA_lid_PRS2_C
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
DUF815
AAA_7
AAA_33
AAA_11
TIP49
AAA_18
RNA_helicase
Csa3_N
NPHP3_N
AAA_3
Mg_chelatase
AAA_24
bpMoxR
AAA_28
TsaE
DUF5906
NACHT
AAA_25
AAA_17
ATPase
Parvo_NS1
IstB_IS21
ATPase_2
GAS
Motif
Other DBs
NCBI-GeneID:
125989766
NCBI-ProteinID:
XP_049612009
LinkDB
All DBs
Position
20:complement(6629335..6632376)
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AA seq
389 aa
AA seq
DB search
MADNREKALQDYRKKLLEHKEVDGRLKELREQLREQTKQYEKSENDLKALQSVGQIIGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHSSPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGLFAIRSDRE
YVTQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacagggagaaagcgctgcaagattaccgtaaaaaattattggaacacaag
gaagtagacgggcggttaaaagaactgagggaacagcttcgagaacaaactaaacagtat
gaaaagtcagagaatgacctcaaagctctgcagagtgttggtcagattattggagaagtc
ctcaaacagctgacagaagagaaattcattgtcaaggccacaaacggtcctcgatatgtg
gttggatgtcgcagacagttggacaagtcacaattgaagccaggcaccagagtggctttg
gatatgactacgctgactataatgaggtatctgccacgagaggtggaccctctggtgtac
aatatgtcccatgaagaccccggtagcgtctcctactctgaaattggtggattgtcggaa
cagatccgtgagctgagagaggtgatagagctgcccctgaccaatcccgagcttttccag
agagttggaatcatccccccaaaaggctgcctgctctatgggcctccaggtactgggaag
acacttctggccagggcggttgcaagtcagctggactgtaactttctcaaggtggtgtcc
agctccatcgttgacaaatacatcggtgagagcgccaggctcatcagagagatgttcaac
tatgccagggaccatcagccttgcatcatcttcatggatgagattgatgccattggcggc
cgacgtttctctgagggaacctctgctgacagagagatccagaggactttgatggagttg
ctgaaccagatggatggatttgatacactacacagagtcaagatgatcatggcaacaaac
agacctgacactctggaccctgccttgttgcgacccggccggctcgaccgcaaaatccac
atcgagctccccaatgaacaggctcgtctggacattctcaaaatccactccagtcccatc
accaagcatggcgaaatagactatgaagccattgtgaagctgtcggacggtttcaacgga
gctgatttaagaaatgtttgcacagaagcaggtttgtttgccatccgctccgacagagag
tacgtcacacaagaagacttcatgaaagctgtgcggaaagtggcagattcaaagaagctg
gagtccaagctggactacaagcctgtatag
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integrated database retrieval system
