Syngnathus scovelli (Gulf pipefish): 125989795
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Entry
125989795 CDS
T08785
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
125989795 (gpcpd1)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
125989795 (gpcpd1)
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Motif
Pfam:
GDPD
CBM_20
TreTu_C
KGK
PI-PLC-X
Motif
Other DBs
NCBI-GeneID:
125989795
NCBI-ProteinID:
XP_049612058
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Position
20:complement(5876596..5884648)
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AA seq
676 aa
AA seq
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MGVSQVTLTVGGETCPGEVIAVVGSCESLGNWSYQKAVVLNTLSGEGNTWTTTVTIPRGV
EVKYRFFKGFFLDPKSAGEPCQVIVNVWESHLQPRTMSTTASHLSVNNGQFGIHNGFKSI
DIGWLTCQTEIRLRLHYSKMSPVSITKKKFKKSRFRIKLTLEGVEEEDDEEEGESSPSSP
HKVPTTLEISMISSKCYKSRHSQPECGYYLEPSQWTEYSIHSMDPDNLELTFEFFEEDLS
ERVVQGDPQPGHVGTACLLSSTFLESGRDHGLVTLPIMGRNSRQTIGKVRVDYLVIRPIS
GLQCDMRATFTKYWKKGKSLNVGHRGAGSTHAAKHHRVRENTIASFRSAANHGAAYVEFD
VHLSKDTVPIVYHDLTCCIATKKKKNDQAVELIEVPVKDLTFDQLQLLKLAHVTAMKGSD
LKDVMEDDEEIDEHQPFPSLSQLFQAVPENVGFNIELKWISQMKDGSWEGNMSTYFNMNK
FLDIILSCILREGGERRIVFSCFDPDICSMVRRKQNKYPILFLTQGVSKKYPELMDIRCQ
NTEIAMSFAQSEDILGISAHTEELLINVNLIREAQVKGLVVFSWGDDNNDHENRRKLREQ
GIDGLIYDRICEDQAEQPNFFQVEEQHSLREVITEETMKSPACSCFSIPCSTAPCSVGKE
QSCNGSAESDSGLSSS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgggggtctcccaggtaactctgactgtcggcggagaaacgtgtccaggggaagtgatt
gccgtggtcgggagttgtgaatcccttggcaactggagctaccaaaaagcggtggtcttg
aacaccctgagcggagaggggaatacatggacgactacggtcaccattcccagaggagtc
gaggtcaagtaccgcttcttcaagggcttctttctggacccaaaaagtgcgggcgagcct
tgtcaggtgatagtcaatgtgtgggagagccatcttcagccccgcaccatgagcaccaca
gcatcccacctgagtgtcaacaacggacagtttggaattcacaatggtttcaagtccatc
gacatcggctggctcacatgccagacggagatccgcttacgtctgcactattccaagatg
tctccggtgtcaatcactaagaagaaattcaagaagtcccgcttcagaatcaaactgaca
ctggagggcgttgaggaggaggacgatgaggaggaaggggaaagcagtccttcgtccccg
cacaaggtgcccaccaccctggagatcagcatgatcagctccaaatgctacaagtcgcgc
cactcgcagcccgagtgcggctactacctggagccttcgcagtggaccgagtacagcatc
cacagcatggaccccgacaacctggagctcacttttgagttctttgaggaggatctgagc
gagcgcgtggtccagggtgaccctcaaccggggcacgtgggcaccgcctgcctcctctcc
tccaccttcctggagagcggccgggaccacggcctcgtcacgctgcccatcatggggcgc
aactccaggcagaccatcggcaaagtgcgagtggactacctggtgatcaggcccatctcg
gggctgcaatgcgacatgagagccaccttcacaaaatactggaagaaaggaaagtccttg
aacgttggccaccggggagctggcagcacgcatgccgccaagcatcacagagtgcgagag
aacaccattgcttcgtttcggagcgccgccaatcacggcgctgcctacgtggagtttgac
gtccacctctccaaggacacggtgcccatcgtgtaccatgacctcacgtgctgcatcgcc
accaaaaaaaagaaaaatgaccaggctgtagagctaatcgaagtccctgtgaaggatctg
acttttgatcagctgcaacttctgaagctggctcacgtcaccgccatgaagggaagcgac
ctcaaagacgtgatggaggacgacgaggaaattgacgagcatcagcccttcccgtcactt
tcgcagctcttccaggctgtcccagaaaacgtgggctttaacatcgaactcaaatggatc
tctcagatgaaggacgggtcatgggaaggcaacatgtccacctacttcaacatgaacaag
ttcttagacatcattttgtcgtgcattctgcgggaaggaggcgagcgacggatcgtcttc
tcttgcttcgaccccgatatctgctccatggtgcgccgtaagcagaacaagtaccccatc
cttttcttgacgcagggcgtctctaaaaaatatcctgagctgatggacatccgctgccag
aacaccgagatcgccatgagcttcgctcaaagcgaggatatcctaggtatcagcgctcac
accgaggagctgctgatcaacgtgaacctcatcagggaggcgcaggtcaaaggcctggtg
gtgttcagctggggcgacgataacaacgaccacgagaacaggaggaagctgagggagcag
ggcatcgatggactcatctatgacagaatctgcgaggaccaagcggaacagcccaacttt
ttccaggtggaggagcaacactccctaagggaggtcatcactgaggaaacaatgaagagt
cccgcctgctcctgcttctccataccgtgctctacggcaccatgctccgtcggcaaggaa
cagtcctgcaacggcagcgccgagtctgactcgggcctcagctcttcatag
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